New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1168581 | 57 (1.030) | 6 (0.120) | 6/240 | 6.2 | 10.8% | intergenic (+98/+155) | eda/leuA | KHG/KDPG aldolase/2‑isopropylmalate synthase |
? | NC_002947 | = 1168654 | 50 (1.040) | intergenic (+171/+82) | eda/leuA | KHG/KDPG aldolase/2‑isopropylmalate synthase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
GTGGGGCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCCTGCTGGCTCAGCGAGCGGTTCAGCGCACTGAACAGCGCCTTGAAGC > NC_002947/1168508‑1168800 | gtgGGGCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGtt < 2:210029/147‑1 (MQ=255) tgGGGCGCTTGGGCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGTTGTTGGACACAGGCCGTAGTTGGAGCGGGTTTAc < 6:156013/149‑1 (MQ=255) ggCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCcg < 3:152261/149‑1 (MQ=255) ggCGCTTGGTCGGCACCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCcg < 7:273856/149‑1 (MQ=255) ggCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGGGCGGGCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCa < 7:118891/149‑1 (MQ=255) ccTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAg > 6:338805/1‑149 (MQ=255) gCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAGAGCCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCcaacaa > 1:265777/1‑148 (MQ=255) ccTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACaaaa > 5:118908/1‑148 (MQ=255) tGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAg < 3:49826/125‑1 (MQ=255) tGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAg > 4:49826/1‑125 (MQ=255) gggTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGc < 3:297688/149‑1 (MQ=255) ttGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCAt > 3:9284/1‑149 (MQ=255) tGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCAt < 6:350741/148‑1 (MQ=255) gCAGTGGTTGTGCTGGCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATc > 5:10334/1‑148 (MQ=255) ttGTGCTGGCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATg > 6:209781/1‑149 (MQ=255) cTGGCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCggg < 5:338805/148‑1 (MQ=255) gCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCttt > 1:23466/1‑149 (MQ=255) cccTTTCGCGGTTACA‑CCCGCTCATACGCACCTTTCTGCGTTGGGAACACACGGGGTGTTGCACACTGGCCTTTTTTGGAGGGGGTTTACCCGCTAATGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTtc < 6:118908/149‑1 (MQ=255) ccTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTtc > 4:313430/1‑148 (MQ=255) cTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTtct > 4:316358/1‑148 (MQ=255) gcgGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGAAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCGTTTGATGCggg > 7:368270/1‑137 (MQ=37) cgGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCggg > 3:204676/1‑136 (MQ=255) cgGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCggg < 4:204676/136‑1 (MQ=255) a‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATcc < 2:95829/140‑1 (MQ=255) a‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATcc > 1:95829/1‑140 (MQ=255) a‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCAttt > 6:332306/1‑147 (MQ=255) ccGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATttcagg < 3:316358/149‑1 (MQ=255) ccGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATttcagg > 1:237090/1‑149 (MQ=255) cTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATttcaggcttcag > 5:152644/1‑149 (MQ=255) cTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATttcaggcttcag > 2:195997/1‑149 (MQ=255) cTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATttcaggcttcag > 5:280371/1‑149 (MQ=255) tACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATttcaggcttcagg > 6:22142/1‑149 (MQ=255) cACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGgccgc > 4:291351/1‑149 (MQ=255) aCCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGgccgcc > 5:51101/1‑149 (MQ=255) cGATCGGCGGGGGGCACACACCGGGTGTTGGACACAGGCCTTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCtt < 7:71457/149‑1 (MQ=255) cGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGttt < 6:121129/50‑1 (MQ=255) cGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGttt > 5:121129/1‑50 (MQ=255) cGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTgg < 2:23466/144‑1 (MQ=255) gggCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCctgct > 2:333109/1‑149 (MQ=255) gggCACACACCGGGTGTTGCCCACAGGCCGTAGTAGGACGGGGTTAACCCGCGAATGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCctgct < 6:10334/149‑1 (MQ=255) ggCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCctgct < 6:358455/148‑1 (MQ=255) gCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCCTGCTgg < 6:96436/149‑1 (MQ=255) acacacCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCCTGCTGGCt > 1:125179/1‑149 (MQ=255) acacCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCctgctg > 5:258008/1‑144 (MQ=255) acacCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCctgctg < 6:258008/144‑1 (MQ=255) acCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCCTGCTGGCTCagc < 2:125179/149‑1 (MQ=255) tgtTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCCTGCTGGCTCAGCGAGCgg < 6:51101/149‑1 (MQ=255) ttGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCCTGCTGGCTCAGCGAGCGGtt < 5:332306/149‑1 (MQ=255) tGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGc < 6:346941/124‑1 (MQ=255) tGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGc > 5:346941/1‑124 (MQ=255) ggACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCCTGCTGGCTCAGCGAGCGGtt > 6:22226/1‑147 (MQ=255) gACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCCTGCTGGCTCAGCGAGCGGTTCa < 1:333109/148‑1 (MQ=255) acacAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCCTGCTGGCTCAGCGAGCGGTTCAgc < 6:280371/149‑1 (MQ=255) cacaGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGTTTCAGGCCGCCTTGGCTTCCTGCTGGCTCAGCGAGCGGTTCAgcg < 3:313430/149‑1 (MQ=255) caGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCCTGCTGGCTCAGCGAGCGGTTCAGCGCa < 5:22142/149‑1 (MQ=255) gCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCCTGCTGGCTCAGCGAGCGGTTCAGCGCACt > 1:225044/1‑148 (MQ=255) gAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCCTGCTGGCTCAGCGAGCGGTTCAGCGCACTGAACAGCGCCt > 2:288232/1‑149 (MQ=255) ggTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCCTGCTGGCTCAGCGAGCGGTTCAGCGCACTGAACAGCGCCTTGAAg > 6:349313/1‑149 (MQ=255) gTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCCTGCTGGCTCAGCGAGCGGTTCAGCGCACTGAACAGCGCCTTGAAGc > 3:65114/1‑149 (MQ=255) | GTGGGGCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAGA‑CCCGCTCCTACGCACCGATCTGCGGTGGGCACACACCGGGTGTTGGACACAGGCCGTAGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTCCAGGCCAACAAAAAAAGCCCGCATCAAACGATGCGGGCTTTCTCATCCCTCATTTCAGGCTTCAGGCCGCCTTGGCTTCCTGCTGGCTCAGCGAGCGGTTCAGCGCACTGAACAGCGCCTTGAAGC > NC_002947/1168508‑1168800 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |