| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 75122 | 37 (0.880) | 4 (0.100) | 4/244 | NT | 9.2% | coding (1088/1374 nt) | trkA | TrK potassium transporter NAD‑binding protein |
| ? | NC_002947 | = 75151 | 44 (1.100) | coding (1059/1374 nt) | trkA | TrK potassium transporter NAD‑binding protein | |||||
CGGATGATCGCACCAATAGTGGTGCCCGGTGGCAGCGTGATGTCCTCGATTGCCTTGCCGACCACCTTGCTCGACTTCGAATCGCCATGTGCCACCGCCTCGATCGCTTCGGCCGCACCGCGGCGCAGCGAGTGCACACTGACGATGTCGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/74969‑75122‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccacCATCGGCACACTGCTGGCGCACGTCCGTCGTGGCGACATCGTCAGTGTGCACTCGCTGCGCCGCGGTGCGGCCGAAGCGATCGAGGCGGTGGCACATGGCGATTCGAAGTCGAGCAAGGTGGTCGGCAAGGCAATCGAGGACATC < NC_002947/75151‑75007 CGGATGATCGCACCAATAGTGGTGCCCGGTGGCAGCGTGATGTCCTCGATTGCCTTGCCGACCACCTTGCTCGACTTCGAATCGCCATGTGCCACCGCCTCGATCGCTTCGGCCGCACCGCGGCGCAGCGAGTGCACACTGACGATGTC < 1:57269/149‑1 CTTGCTCGACTTCGAATCGCCATGTGCCACCGCCTCGATCGCTTCGGCCGCACCGCGGCGCAGCGAGTGCACACTGACGATGTCGCCACCATCGGCACACTGCTGGCGCACGTCCGTCGTG > 1:190164/1‑121 CTTGCTCGACTTCGAATCGCCATGTGCCACCGCCTCGATCGCTTCGGCCGCACCGCGGCGCAGCGAGTGCACACTGACGATGTCGCCACCATCGGCACACTGCTGGCGCACGTCCGTCGTG < 2:190164/121‑1 CCATGTGCCACCGCCTCGATCGCTTCGGCCGCACCGCGGCGCAGCGAGTGCACACTGACGATGTCGCCACCATCGGCACACTGCTGGCGCACGTCCGTCGTGGCGACATCGTCAG < 7:207837/115‑1 CCATGTGCCACCGCCTCGATCGCTTCGGCCGCACCGCGGCGCAGCGAGTGCACACTGACGATGTCGCCACCATCGGCACACTGCTGGCGCACGTCCGTCGTGGCGACATCGTCAG > 8:207837/1‑115 ccgatctCACCATCGGCACACTGCTGGCGCACGTCCGTCGTGGCGACATCGTCAGTGTGCACTCGCTGCGCCGCGGTGCGGCCGAAGCGATCGAGGCGGTGGCACATGGCGATTCGAAGTCGAGCAAGGTGGTCGGCAAGGCAATCGAG < 3:40019/142‑1 TCGCCACCATCGGCACACTGCTGGCGCACGTCCGTCGTGGCGACATCGTCAGTGTGCACTCGCTGCGCCGCGGTGCGGCCGAAGCGATCGAGGCGGTGGCACATGGCGATTCGAAGTCGAGCAAGGTGGTCGGCAAGGCAATCGAGGA > 1:119254/1‑148 CGCCACCATCGGCACACTGCTGGCGCACGTCCGTCGTGGCGACATCGTCAGTGTGCACTCGCTGCGCCGCGGTGCGGCCGAAGCGATCGAGGCGGTGGCACATGGCGATTCGAAGTCGAGCAAGGTGGTCGGCAAGGCAATCGAGGACA > 6:3021/1‑149 CCACCATCGGCACACTGCTGGCGCACGTCCGTCGTGGCGACATCGTCAGTGTGCACTCGCTGCGCCGCGGTGCGGCCGAAGCGATCGAGGCGGTGGCACATGGCGATTCGAAGTCGAGCAAGGTGGTCGGCAAGGCAATCGAGGACATC < 2:119254/149‑1 ACCATCGGCACACTGCTGGCGCACGTCCGTCGTGGCGACATCGTCAGTGTGCACTCGCTGCGCCGCGGTGCGGCCGAAGCGATCGAGGCGGTGGCACATGGCGATTCGAAGTCGAGCAAG > 5:65229/1‑120 ACCATCGGCACACTGCTGGCGCACGTCCGTCGTGGCGACATCGTCAGTGTGCACTCGCTGCGCCGCGGTGCGGCCGAAGCGATCGAGGCGGTGGCACATGGCGATTCGAAGTCGAGCAAG < 6:65229/120‑1 CGGATGATCGCACCAATAGTGGTGCCCGGTGGCAGCGTGATGTCCTCGATTGCCTTGCCGACCACCTTGCTCGACTTCGAATCGCCATGTGCCACCGCCTCGATCGCTTCGGCCGCACCGCGGCGCAGCGAGTGCACACTGACGATGTCGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/74969‑75122‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccacCATCGGCACACTGCTGGCGCACGTCCGTCGTGGCGACATCGTCAGTGTGCACTCGCTGCGCCGCGGTGCGGCCGAAGCGATCGAGGCGGTGGCACATGGCGATTCGAAGTCGAGCAAGGTGGTCGGCAAGGCAATCGAGGACATC < NC_002947/75151‑75007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |