New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 116151	52 (1.230)	3 (0.070)	3/246	NT	5.5%	coding (454/894 nt)	PP_0110	CyoE‑like protoheme IX farnesyltransferase
	?	NC_002947	= 116188	54 (1.340)					coding (491/894 nt)	PP_0110	CyoE‑like protoheme IX farnesyltransferase

TGGCGCTGCTGGGCATGGTCCTGCTGCTGGTGTTCACCAACGCCCTCACCGCCTGGCTGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/116002‑116151 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgCTTACCGCCACCCAGCCGAGCAACGGCGGAGCGGCACCGGCCAGGCCACCGATGACGATGTTCTGTGGCGTGGCGCGCTTGAGAAAGCCGGTGTAGAGCACCGCATAACCGAGTAATGAGGCCAGGGTCAGCCAGGCGGTGAGGG  <  NC_002947/116188‑116044                                                                                                                                                                                                                                                                                                         TGGCGCTGCTGGGCATGGTCCTGCTGCTGGTGTTCACCAACGCCCTCACCGCCTGGCTGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCC                                                                                                                                                    >  5:142038/1‑149                                             CTCACCGCCTGGCTGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGCTTACCGCCACCCAGCCGAGCAACGGCGGAGCGGCACCGGCCA                                                                                                        <  6:26597/149‑1                                                 CCGCCTGGCTGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGCTTACCGCCACCCAGCCGAGCAACGGCGGAGCGGCACCGGCCAG                                                                                                       <  5:205347/146‑1                                                 CCGCCTGGCTGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGCTTACCGCCACCCAGCCGAGCAACGGCGGAGCGGCACCGGCCAG                                                                                                       >  6:205347/1‑146                                                                                                                                                 TGGCCGCTTACCGCCACCCAGCCGAGCAACGGCGGAGCGGCACCGGCCAGGCCACCGATGACGATGTTCTGTGGCGTGGCGCGCTTGAGAAAGCCGGTGTAGAGCACCGCATAACCGAGTAATGAGGCCAGGGTCAGCCAGGCGGTGAG    <  3:104057/149‑1                                                                                                                                                 TGGCCGCTTACCGCCACCCAGCCGAGCAACGGCGGAGCGGCACCGGCCAGGCCACCGATGACGATGTTCTGTGGCGTGGCGCGCTTGAGAAAGCCGGTGTAGAGCACCGCATAACCGAGTAATGAGGCCAGGGTCAGCCAGGCGGTGAG    <  5:73454/149‑1                                                                                                                                                 TGGCCGCTTACCGCCACCCAGCCGAGCAACGGCGGAGCGGCACCGGCCAGGCCACCGATGACGATGTTCTGTGGCGTGGCGCGCTTGAGAAAGCCGGTGTAGAGCACCGCATAACCGAGTAATGAGGCCAGGGTCAGCCAGGCGGTGAG    >  8:22944/1‑149                                                                                                                                                   GCCGCTTACCGCCACCCAGCCGAGCAACGGCGGAGCGGCACCGGCCAGGCCACCGATGACGATGTTCTGTGGCGTGGCGCGCTTGAGAAAGCCGGTGTAGAGCACCGCATAACCGAGTAATGAGGCCAGGGTCAGCCAGGCGGTGAGGG  >  2:187780/1‑149                                                                                                                                                                                                                                                                                                         TGGCGCTGCTGGGCATGGTCCTGCTGCTGGTGTTCACCAACGCCCTCACCGCCTGGCTGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/116002‑116151 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgCTTACCGCCACCCAGCCGAGCAACGGCGGAGCGGCACCGGCCAGGCCACCGATGACGATGTTCTGTGGCGTGGCGCGCTTGAGAAAGCCGGTGTAGAGCACCGCATAACCGAGTAATGAGGCCAGGGTCAGCCAGGCGGTGAGGG  <  NC_002947/116188‑116044

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.