New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 116151	52 (1.230)	3 (0.070)	3/246	NT	5.5%	coding (454/894 nt)	PP_0110	CyoE‑like protoheme IX farnesyltransferase
	?	NC_002947	= 116188	54 (1.340)					coding (491/894 nt)	PP_0110	CyoE‑like protoheme IX farnesyltransferase

CCCTCACCGCCTGGCTGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATACGCCAAGGCCGATATCCCGATGTTGCCGGTGACCCACGGCGAGCGCTAC  >  NC_002947/116044‑116336                                                                                                                                                 |                                                                                                                                                     cccTCACCGCCTGGCTGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGcggc                                                                                                                                                  >  2:187780‑M2/1‑145 (MQ=255)   cTCACCGCCTGGCTGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGcggcca                                                                                                                                                >  8:22944‑M2/1‑143 (MQ=255)   cTCACCGCCTGGCTGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGcggcca                                                                                                                                                <  3:104057‑M2/149‑7 (MQ=255)   cTCACCGCCTGGCTGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGcggcca                                                                                                                                                <  5:73454‑M2/149‑7 (MQ=255)      aCCGCCTGGCTGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCAt                                                                                                                                               <  4:156409/147‑1 (MQ=255)      aCCGCCTGGCTGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCAt                                                                                                                                               <  3:173297/147‑1 (MQ=255)              gCTGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGTGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAgcgc                                                                                                                                       <  5:211181/147‑1 (MQ=255)                tGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGaa                                                                                                                                   >  7:96752/1‑149 (MQ=255)                tGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGaa                                                                                                                                   >  7:100343/1‑149 (MQ=255)                   cccTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAAccc                                                                                                                                <  6:147043/149‑1 (MQ=255)                    ccTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCt                                                                                                                               >  1:260769/1‑149 (MQ=255)                           tCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTgctgct                                                                                                                        >  1:7170/1‑149 (MQ=255)                            cATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCtt                                                                                                                       >  6:197725/1‑149 (MQ=255)                             aTTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTtg                                                                                                                      <  4:45455/149‑1 (MQ=255)                                     gTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATc                                                                                                              <  4:43647/149‑1 (MQ=255)                                          gCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCAtttt                                                                                                         >  1:16762/1‑149 (MQ=255)                                            ggTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCg                                                                                                       >  4:193904/1‑149 (MQ=255)                                                      acCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTc                                                                                                        >  4:9474/1‑138 (MQ=255)                                                      acCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTc                                                                                                        <  3:9474/138‑1 (MQ=255)                                                      acCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCGGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGAcccc                                                                                             <  6:73454/149‑1 (MQ=255)                                                        cGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCccgc                                                                                           <  2:7170/149‑1 (MQ=255)                                                            tttCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTtgtg                                                                                                                    <  4:94619/120‑1 (MQ=255)                                                            tttCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTtgtg                                                                                                                    >  3:94619/1‑120 (MQ=255)                                                                tcAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTc                                                                                   >  1:240734/1‑149 (MQ=255)                                                                 cAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCt                                                                                  >  2:67428/1‑149 (MQ=255)                                                                   aGCGCTCAACGAAACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCTCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTTATCATTTTCGCCTGGACCCCGCCGCATTTCTgg                                                                                <  6:106207/149‑1 (MQ=255)                                                                    gcgcgcCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGa                                                                                                 <  1:112234/131‑1 (MQ=255)                                                                    gcgcgcCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGa                                                                                                 >  2:112234/1‑131 (MQ=255)                                                                     cgcgcCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGgc                                                                              <  6:44880/149‑1 (MQ=255)                                                                         ccacgccacAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTg                                                                          >  3:49848/1‑149 (MQ=255)                                                                         ccacgccacAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTg                                                                          <  5:197725/149‑1 (MQ=255)                                                                          cacgccacAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTgg                                                                         >  1:175954/1‑149 (MQ=255)                                                                          cacgccacAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTgg                                                                         <  6:147642/149‑1 (MQ=255)                                                                           acgccacAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGc                                                                                                      <  3:1637/119‑1 (MQ=255)                                                                           acgccacAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCAGGGTGGCTGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGc                                                                                                      >  4:1637/1‑119 (MQ=255)                                                                                   gAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCAcc                                                                <  1:67428/149‑1 (MQ=255)                                                                                    aaCATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCg                                                               <  8:96752/149‑1 (MQ=255)                                                                                     aCATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCg                                                               <  8:100343/148‑1 (MQ=255)                                                                                      cATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCa                                                             <  2:175954/149‑1 (MQ=255)                                                                                       aTCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATTTCAGCGCCGACCCCTTGCGGATTGTGTGGATCATTTTCGCATGGACCCCGCCGAATTTCTGGGCGATGGCCATCCAcccc                                                              >  4:193650/1‑145 (MQ=255)                                                                                       aTCGTCAGCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTATGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTTATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCTCTGGCCATGCACCGCaa                                                            <  8:108812/149‑1 (MQ=255)                                                                                        tCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAag                                                           <  2:16762/149‑1 (MQ=255)                                                                                          gTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAagga                                                         <  4:104057/149‑1 (MQ=255)                                                                                          gTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAagga                                                         <  2:240734/149‑1 (MQ=255)                                                                                                ggTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATa                                                   >  5:249209/1‑149 (MQ=255)                                                                                                      ctggccGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGcggccaggccaccgatgacgatgttctgtggcgtggcgcgcttgagaaagccggtgtagagcaccgcataaccgagtaatgaggccagggtcagccaggcgg                                                <  5:205347‑M2/146‑103 (MQ=255)                                                                                                      ctggccGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGcggccaggccaccgatgacgatgttctgtggcgtggcgcgcttgagaaagccggtgtagagcaccgcataaccgagtaatgaggccagggtcagccaggcgg                                                >  6:205347‑M2/1‑44 (MQ=255)                                                                                                      ctggccGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATACGcc                                               >  2:44559/1‑147 (MQ=255)                                                                                                       tggccGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGcggccaggccaccgatgacgatgttctgtggcgtggcgcgcttgagaaagccggtgtagagcaccgcataaccgagtaatgaggccagggtcagccaggcggtgag                                            <  6:26597‑M2/149‑107 (MQ=255)                                                                                                                ccGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATACGCCAAGGCCGATATc                                   >  8:9365/1‑149 (MQ=255)                                                                                                                 cGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATACGCCAAGGCCGATATcc                                  >  7:17647/1‑149 (MQ=255)                                                                                                                   cTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATACGCCAAGGCCGATATccc                                 >  6:133952/1‑148 (MQ=255)                                                                                                                      cgccgTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATACGCCAAGGCCGATATCCCGAt                              <  7:101087/148‑1 (MQ=255)                                                                                                                      cgccgTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATACGCCAAGGCCGATATCCCGATg                             >  7:65795/1‑149 (MQ=255)                                                                                                                      cgccgTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATACGCCAAGGCCGATATCCCGATg                             >  2:110985/1‑149 (MQ=255)                                                                                                                          gTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGTACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATACGCCAAGGCCGATATCCCGATGTTGc                         <  6:249209/149‑1 (MQ=255)                                                                                                                               tCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCt                                                                                  <  1:189842/87‑1 (MQ=255)                                                                                                                               tCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCt                                                                                  >  2:189842/1‑87 (MQ=255)                                                                                                                                cGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGCCCATCCACCGCAAGGAGGAATACGCCAAGGCCGATATCCCGATGTTGCCGGTGa                   <  8:17647/149‑1 (MQ=255)                                                                                                                                        tGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATACGCCAAgg                                           <  7:240343/117‑1 (MQ=255)                                                                                                                                        tGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATACGCCAAgg                                           >  8:240343/1‑117 (MQ=255)                                                                                                                                        tGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATACGCCAAGGCCGATATCCCGATGTTGCCGGTGACCCACGGc           <  7:9365/149‑1 (MQ=255)                                                                                                                                            ggTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATACGCCAAGGCCGATATCCCGATGTTGCCGGTGACCCACGGCGAgc       >  7:120636/1‑149 (MQ=255)                                                                                                                                              tAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATACGCCAAGGCCGATATCCCGATGTTGCCGGTAACCCACGGCGAgcgc     <  1:110985/149‑1 (MQ=255)                                                                                                                                                 gCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATACGCCAAGGCCGATATCCCGATGTTGCCGGTGACCCACGGCGAGCGCTac  <  8:65795/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                     CCCTCACCGCCTGGCTGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGTCAGCGCCGAACCCTTGCTGCTTGTGTTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATACGCCAAGGCCGATATCCCGATGTTGCCGGTGACCCACGGCGAGCGCTAC  >  NC_002947/116044‑116336

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.