New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	670326 =	45 (1.070)	4 (0.100)	4/246	NT	7.9%	coding (1768/2355 nt)	pbpC	peptidoglycan glycosyltransferase
	?	NC_002947	670367 =	50 (1.240)					coding (1809/2355 nt)	pbpC	peptidoglycan glycosyltransferase

TTGCTCATCGGCTGACCCAGCGGCCAACAGATCGCTGCAACGCCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/670372‑670326 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgatGAGCAAGCAGGACACCAACTGTCGGCGTCAGCGCTTT‑GCATGGACCCTGGACGGCACCACGCCGCCAACCTTGCA‑GGCAGCCGACCAGCCGCTGGGCCTGGGTTTGCGCGAACAAGTATGGGTCAACGAGCGGGGCTTGCGGG  >  NC_002947/670367‑670509                                                                                                                                                                                                  TTGCTCATCGGCTGACCCAGCGGCCAACAGATCGCTGCAACGCCGATGAGCAAGCAGGACACCAACTGTCGGCGTCAGCGCTTT‑GCATGGACCCTGGACGGCACCACGCCGCCAACCTTGCA‑GGCAGCCGACCAGCCGCTGGGCCTGGG                                           >  4:183446/1‑149    CTCATCGGCTGACCCAGCGGCCAACAGATCGCTGCAACGCCGATGAGCAAGCAGGACACCAACTGTCGGCGTCAGCGCTTT‑GCATGGACCCTGGACGGCACCACGCCGCCAACCTTGCA‑GGCAGCCGACCAGCCGCTGGGCCTGGGTTT                                        <  3:183446/149‑1     TCATCGGCTGACCCAGCGGCCAACAGATCGCTGCAACGCCGATGAGCAAGCAGGACACCAACTGTCGGCGTCAGCGCTTT‑GCATGGACCCTGGACGGCACCACGCCGCCAACCTTGCA‑GGCAGCCGACCAGCCGCTGGGCCTGGGTTTG                                       >  2:212529/1‑149                                  GCTGCAACGCCGATGAGCAAGCAGGACACCAACTGTCGGCGTCAGCGCTTT‑GCATGGACCCTGGACGGCACCACGCCGCCAACCTTGCACCGCAGCCGACCAGCCGCTGGGCCTGGGTTTGCGCGAACAAGTATGGGTCAACGAGCGGG           <  1:212529/149‑1                                          GCCGATGAGCAAGCAGGACACCAACTGTCGGCGTCAGCGCTTT‑GCATGGACCCTGGACGGCACCACGCCGCCAACCTTGCA‑GGCAGCCGACCAGCCGCTGGGCCTGGGTTTGCGCGAACAAGTATGGGTCAACGAGCGGGGCTTGCGGG  <  2:188635/149‑1                                          GCCGATGAGCAAGCAGGACACCAACTGTCGGCGTCAGCGCTTT‑GCATGGACCCTGGACGGCACCACGCCGCCAACCTTGCA‑GGCAGCCGACCAGCCGCTGGGCCTGGGTTTGCGCGAACAAGTATGGGTCAACGAGCGGGGCTTGCGGG  <  6:59588/149‑1                                           CCGATGAGCAAGCAGGACACCAACTGTCGGCGTCAGCGCTTTGGCATGGACCATGCACGGCACCACGCCGCCAACCTTGCA‑GGCAGCCGACCAGCCGCTGGGCCTGGGTTTGCGCGAACAAGTATGGGTCAACGAGCGGGGCTTGCGGG  >  1:52308/1‑149                                                                                                                                                                                                  TTGCTCATCGGCTGACCCAGCGGCCAACAGATCGCTGCAACGCCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/670372‑670326 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgatGAGCAAGCAGGACACCAACTGTCGGCGTCAGCGCTTT‑GCATGGACCCTGGACGGCACCACGCCGCCAACCTTGCA‑GGCAGCCGACCAGCCGCTGGGCCTGGGTTTGCGCGAACAAGTATGGGTCAACGAGCGGGGCTTGCGGG  >  NC_002947/670367‑670509

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.