New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1018034 =	41 (0.970)	3 (0.080)	3/240	NT	6.4%	intergenic (‑173/+58)	PP_5461/dppF	hypothetical protein/dipeptide ABC transporter ATP‑binding protein
	?	NC_002947	1018081 =	50 (1.270)					intergenic (‑220/+11)	PP_5461/dppF	hypothetical protein/dipeptide ABC transporter ATP‑binding protein

TGCGACCGAGCGGTGTGCCAAGGAGGTGCCGGCACTGAGGCAGGTGAGTACGCGGCAGGTTGCGTGCCACTATGCGGAGCAGTTTCTTTAACTGTTAGAAAACTGGGCAGCCCTCAGTGCGAAAAACAGCAGTTTGCTGCGCTGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1018182‑1018034 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcccagTTTTCTAACAGTTAAAGAAACTGCTCCGCATAGTGGCACGCAACCTGCCGCGTACTCACCTGCCTCAGTGCCGGCACCTCCTTGGCACACCGCTCGGTCGCATACGGGCAGCGTTTGTGAAACGCACACCCATCCGGCGGGTTCAGC  >  NC_002947/1018081‑1018227                                                                                                                                                                                                                                                                                                          TGCGACCGAGCGGTGTGCCAAGGAGGTGCCGGCACTGAGGCAGGTGAGTACGCGGCAGGTTGCGTGCCACTATGCGGAGCAGTTTCTTTAACTGTTAGAAAACTGGGCAGCCCTCAGTGCGAAAAACAGCAGTTTGCTGCGCTGCCCAG                                                                                                                                                     >  8:123133/1‑149                                                    GCGGCAGGTTGCGTGCCACTATGCGGAGCAGTTTCTTTAACTGTTAGAAAACTGGGCAGCCCTCAGTGCGAAAAACAGCAGTTTGCTGCGCTGCCC                                                                                                                                                       <  1:37713/96‑1                                                    GCGGCAGGTTGCGTGCCACTATGCGGAGCAGTTTCTTTAACTGTTAGAAAACTGGGCAGCCCTCAGTGCGAAAAACAGCAGTTTGCTGCGCTGCCC                                                                                                                                                       >  2:37713/1‑96                                                                                             TGTTAGAAAACTGGGCAGCCCTCAGTGCGAAAAACAGCAGTTTGCTGCGCTGCCCAGTTTTCTAACAGTTAAAGAAACTGCTCCGCATAGTGGCACGCAACCTGCCGCGTACTCACCTGCCTCAGTGCCGG                                                                           <  7:98483/131‑1                                                                                             TGTTAGAAAACTGGGCAGCCCTCAGTGCGAAAAACAGCAGTTTGCTGCGCTGCCCAGTTTTCTAACAGTTAAAGAAACTGCTCCGCATAGTGGCACGCAACCTGCCGCGTACTCACCTGCCTCAGTGCCGG                                                                           >  8:98483/1‑131                                                                                                       CTGGGCAGCCCTCAGTGCGAAAAACAGCAGTTTGCTGCGCTGCCCAGTTTTCTAACAGTTAAAGAAACTGCTCCGCATAGTGGCACGCAACCTGCCGCGTACTCACCTGCCTCAGTGCCGGCACCTCCTTGGCACACCGCTCGGTCGC                                                >  4:134131/1‑148                                                                                                                                                  CCAGTTTTCTAACAGTTAAAGAAACTGCTCCGCATAGTGGCACGCAACCTGCCGCGTACTCACCTGCCTCAGTGCCGGCACCTCCTTGGCACACCGCTCGGTCGCATACGGGCAGCGTTTGTGAAACGCACACCCATCCGGCGGGTTCA    <  2:239012/149‑1                                                                                                                                                  CCAGTTTTCTAACAGTTAAAGAAACTGCTCCGCATAGTGGCACGCAACCTGCCGCGTACTCACCTGCCTCAGTGCCGGCACCTCCTTGGCACACCGCTCGGTCGCA                                               >  5:268825/1‑106                                                                                                                                                  CCAGTTTTCTAACAGTTAAAGAAACTGCTCCGCATAGTGGCACGCAACCTGCCGCGTACTCACCTGCCTCAGTGCCGGCACCTCCTTGGCACACCGCTCGGTCGCA                                               <  6:268825/106‑1                                                                                                                                                    AGTTTTCTAACAGTTAAAGAAACTGCTCCGCATAGTGGCACGCAACCTGCCGCGTACTCACCTGCCTCAGTGCCGGCACCTCCTTGGCACACCGCTCGGTCGCATACGGGCAGCGTTTGTGAAACGCACACCCATCCGGCGGGTTCAGC  >  5:271556/1‑149                                                                                                                                                                                                                                                                                                          TGCGACCGAGCGGTGTGCCAAGGAGGTGCCGGCACTGAGGCAGGTGAGTACGCGGCAGGTTGCGTGCCACTATGCGGAGCAGTTTCTTTAACTGTTAGAAAACTGGGCAGCCCTCAGTGCGAAAAACAGCAGTTTGCTGCGCTGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1018182‑1018034 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcccagTTTTCTAACAGTTAAAGAAACTGCTCCGCATAGTGGCACGCAACCTGCCGCGTACTCACCTGCCTCAGTGCCGGCACCTCCTTGGCACACCGCTCGGTCGCATACGGGCAGCGTTTGTGAAACGCACACCCATCCGGCGGGTTCAGC  >  NC_002947/1018081‑1018227

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.