New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1039885 | 45 (1.070) | 3 (0.080) | 3/242 | NT | 6.4% | coding (242/921 nt) | PP_0899 | ferredoxin reductase |
? | NC_002947 | = 1039923 | 46 (1.160) | coding (280/921 nt) | PP_0899 | ferredoxin reductase |
CCTTACAGTTGCCGCGCCGGCAGTTGCCACGCCTGCCTGGTGCGCTGCCTGGAAGGGCAACCGGCAGACGCTTTGCCCGAGGCATTGGCATTGGAGAAACATGCCCAGGGCTGGCGTCTGGCTTGCCAGTGCCGGGTGGTCGAGGACCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1039734‑1039885 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacctgcgCCGGTACGCCACCCTGCTGGGGGTCGTACAACGCCACACGCAGGTCCTCGACCACCCGGCACTGGCAAGCCAGACGCCAGCCCTGGGCATGTTTCTCCAATGCCAATGCCTCGGGCAAAGCGTCTGCCGGTTGCCCTTCCAGGCAGCG < NC_002947/1039923‑1039776 CCTTACAGTTGCCGCGCCGGCAGTTGCCACGCCTGCCTGGTGCGCTGCCTGGAAGGGCAACCGGCAGACGCTTTGCCCGAGGCATTGGCATTGGAGAAACATGCCCAGGGCTGGCGTCTGGCTTGCCAGTGCCGGGTGGTCGAGGACC < 3:87847/148‑1 CTTACAGTTGCCGCGCCGGCAGTTGCCACGCCTGCCTGGTGCGCTGCCTGGAAGGGCAACCGGCAGACGCTTTGCCCGAGGCATTGGCATTGGAGAAACATGCCCAGGGCTGGCGTCTGGCTTGCCAGTGCCGGGTGGTCGAGGACCTG > 3:117015/1‑149 CCTGGAAGGGCAACCGGCAGACGCTTTGCCCGAGGCATTGGCATTGGAGAAACATGCCCAGGGCTGGCGTCTGGCTTGCCAGTGCCGGGTGGTCGAGGACCTGCGCCGGTACGCCACCCTGCTGGGGGTCGTACAACGCCACACGCAGG < 3:227595/149‑1 TGGAAGGGCAACCGGCAGACGCTTTGCCCGAGGCATTGGCATTGGAGAAACATGCCCAGGGCTGGCGTCTGGCTTGCCAGTGCCGGGTGGTCGAGGACCTGCGCCGGTACGCCACCCTGCTGGGGGTCGTACAACGCCACACGCAGGTC > 2:95215/1‑149 GAAGGGCAACCGGCAGACGCTTTGCCCGAGGCATTGGCATTGGAGAAACATGCCCAGGGCTGGCGTCTGGCTTGCCAGTGCCGGGTGGTCGAGGACCTGCGCCGGTACGCCACCCTGCTGGGGGTCGTACAACGCCACACGCAGGTCCT < 1:95215/149‑1 ACCTGCGCCGGTACGCCACCCTGCTGGGGGTCGTACAACGCCACACGCAGGTCCTCGACCACCCGGCACTGGCAAGCCAGACGCCAGCCCTGGGCATGTTTCTCCAATGCCAATGCCTCGGGCAAAGCGTCTGCCGGTTGCCCTTCCAG < 1:221055/149‑1 GCCGGTACGCCACCCTGCTGGGGGTCGTACAACGCCACACGCAGGTCCTCGACCACCCGGCACTGGCAAGCCAGACGCCAGCCCTGGGCATGTTTCTCCAATGCCAATGCCTCGGGCAAAGCGTCTGCCGGTTGCCCTTCCAGGCAGCG < 5:277133/149‑1 CCTTACAGTTGCCGCGCCGGCAGTTGCCACGCCTGCCTGGTGCGCTGCCTGGAAGGGCAACCGGCAGACGCTTTGCCCGAGGCATTGGCATTGGAGAAACATGCCCAGGGCTGGCGTCTGGCTTGCCAGTGCCGGGTGGTCGAGGACCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1039734‑1039885 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacctgcgCCGGTACGCCACCCTGCTGGGGGTCGTACAACGCCACACGCAGGTCCTCGACCACCCGGCACTGGCAAGCCAGACGCCAGCCCTGGGCATGTTTCTCCAATGCCAATGCCTCGGGCAAAGCGTCTGCCGGTTGCCCTTCCAGGCAGCG < NC_002947/1039923‑1039776 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |