| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1083135 = | 53 (1.260) | 3 (0.080) | 3/242 | NT | 5.9% | coding (2790/3822 nt) | PP_0938 | hypothetical protein |
| ? | NC_002947 | 1083175 = | 46 (1.160) | coding (2830/3822 nt) | PP_0938 | hypothetical protein | |||||
AGCGGCGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1083288‑1083135‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctggGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGACCCGC > NC_002947/1083175‑1083319 AGCGGCGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGG > 2:180117/1‑149 CGGCGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCC < 1:180117/149‑1 GGCGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCT > 2:47125/1‑149 AATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGG < 7:185646/114‑1 AATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGG > 8:185646/1‑114 CAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGC > 5:204208/1‑149 CCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGACCCG < 3:103673/149‑1 CTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGACCCGC > 3:44199/1‑149 AGCGGCGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1083288‑1083135‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctggGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGACCCGC > NC_002947/1083175‑1083319 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |