| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1320342 | 46 (1.090) | 3 (0.070) | 3/246 | NT | 6.1% | coding (2389/2586 nt) | PP_1154 | sensory box protein |
| ? | NC_002947 | = 1320375 | 48 (1.190) | coding (2356/2586 nt) | PP_1154 | sensory box protein | |||||
CCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1320189‑1320342‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgAACAACAACGGCGGCAGCGACCGCGCTGTGGTCCAGGCCATCATCAACCTGGGCGAGGCGATGGGGCTGACAGTGACAGCCGAAGGCGTGGAAAGCGAACATCAACTCAAGTCGCTGGAAAAGGACCGCTGCCATGAAGTGCAAGG < NC_002947/1320375‑1320230 CCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATG < 3:89498/149‑1CCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATG < 4:262957/149‑1 CGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCATGTTGATGATGG > 3:264633/1‑149 CTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGCTGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGAACAACAACGGCGGCAGCGACCGCGCTGTGGTCCAGGCCATCA < 3:11531/149‑1 TTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGAACAACAACGGCGGCAGCGACCGCGCTGTGGTCCAGGCCA < 3:205325/128‑1 TTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGAACAACAACGGCGGCAGCGACCGCGCTGTGGTCCAGGCCA > 4:205325/1‑128 GCCTGAACAACAACGGCGGCAGCGACCGCGCTGTGGTCCAGGCCATCATCAACCTGGGCGAGGCGATGGGGCTGACAGTGACAGCCGAAGGCGTGGAAAGCGAACATCAACTCAAGTCGCTGGAAAAGGACCGCTGCCATGAAGTGCAA < 8:123183/149‑1 CTGAACAACAACGGCGGCAGCGACCGCGCCGTGGTCCAGGCCATCATCAACCTGGGCGAGGCGATGGGGCTGACAGTGACAGCCGAAGGCGTGGAAAGCGAACATCAACTCAAGTCGCTGGAAAAGGACCGCTGCCATGAAGTGCAAGG < 1:24687/149‑1 CTGAACAACAACGGCGGCAGCGACCGCGCCGTGGTCCAGGCCATCATCAACCTGGGCGAGGCGATGGGGCTGACAGTGACAGCCGAAGGCGTGGAAAGCGAACATCAACTCAAGTCGCTGGAAAAGGACCGCTGCCATGAAGTGCAAGG < 1:64877/149‑1 CCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1320189‑1320342‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgAACAACAACGGCGGCAGCGACCGCGCTGTGGTCCAGGCCATCATCAACCTGGGCGAGGCGATGGGGCTGACAGTGACAGCCGAAGGCGTGGAAAGCGAACATCAACTCAAGTCGCTGGAAAAGGACCGCTGCCATGAAGTGCAAGG < NC_002947/1320375‑1320230 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |