| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1455374 = | 46 (1.090) | 4 (0.100) | 4/248 | NT | 7.8% | coding (908/1455 nt) | PP_1273 | multidrug MFS transporter outer membrane protein |
| ? | NC_002947 | 1455462 = | 50 (1.230) | coding (996/1455 nt) | PP_1273 | multidrug MFS transporter outer membrane protein | |||||
CCTGGAAGCCGACACTGCCCGACAGGCGGATGCTGGGGTAAAAATCCGCCTTGGCCACGCCAATGCTGGCGGTGGCGGCATGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1455460‑1455374‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGCCTTCGGTCCACAGATGTCGCTGCCGATTTTCGAAGGTGGCCGGCTCAAGGGCACCCTGGAACTGCGCGAGGCGCAACAGCAGGAAGCCGCGCTGAACTATCG > NC_002947/1455462‑1455608 CCTGGAAGCCGACACTGCCCGACAGGCGGATGCTGGGGTAAAAATCCGCCTTGGCCACGCCAATGCTGGCGGTGGCGGCATGCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGCCTTCG < 1:130750/137‑1CCTGGAAGCCGACACTGCCCGACAGGCGGATGCTGGGGTAAAAATCCGCCTTGGCCACGCCAATGCTGGCGGTGGCGGCATGCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGCCTTCG > 2:130750/1‑137 CTGGAAGCCGACACTGCCCGACAGGCGGATGCTGGGGTAAAAATCCGCCTTGGCCACGCCAATGCTGGCGGTGGCGGCATGCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGCCTTCGGTCCACAGATGTC > 7:68189/1‑149 AGCCGACACTGCCCGACAGGCGGATGCTGGGGTAAAAATCCGCCTTGGCCACGCCAATGCTGGCGGTGGCGGCATGCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGCCTTCGGTCCACAGATGTCGCTGC < 8:68189/149‑1 CAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGCCTTCGGTCCACAGATGTCGCTGCCGATTTTCGAAGGTGGCCGGCTCAAGGGCACCCTGGAACTGCGCGAGGCGCAACAGCAGG > 3:41239/1‑133 CAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGCCTTCGGTCCACAGATGTCGCTGCCGATTTTCGAAGGTGGCCGGCTCAAGGGCACCCTGGAACTGCGCGAGGCGCAACAGCAGG < 4:41239/133‑1 GGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGCCTTCGGTCCACAGATGTCGCTGCCGATTTTCGAAGGTGGCCGGCTCAAGGGCACCCTGGAACTGCGCGAGGCGCAACAGCAGGAAGCCGCGCTGAACTATC < 5:97290/149‑1 GCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGCCTTCGGTCCACAGATGTCGCTGCCGATTTTCGAAGGTGGCCGGCTCAAGGGCACCCTGGAACTGCGCGAGGCGCAACAGCAGGAAGCCGCGCTGAACTATCG > 6:44684/1‑149 CCTGGAAGCCGACACTGCCCGACAGGCGGATGCTGGGGTAAAAATCCGCCTTGGCCACGCCAATGCTGGCGGTGGCGGCATGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1455460‑1455374‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGCCTTCGGTCCACAGATGTCGCTGCCGATTTTCGAAGGTGGCCGGCTCAAGGGCACCCTGGAACTGCGCGAGGCGCAACAGCAGGAAGCCGCGCTGAACTATCG > NC_002947/1455462‑1455608 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |