New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 155847540 (0.950)4 (0.100) 4/242 NT 8.4% coding (426/732 nt) PP_1369 hypothetical protein
?NC_002947 = 1558529 50 (1.260)coding (372/732 nt) PP_1369 hypothetical protein

CCCGCCAGCGCTGGCATTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1558321‑1558475
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcaggGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACTGAAATACACCAGTACACCTCAGCATCTGTACCGCTTGCCAGACTTTACGGCGATTGATGCGCCAGGCCTGGTCTGGAGCGCCCG  <  NC_002947/1558529‑1558383
                                                                                                                                                                                                                                                                                                              
CCCGCCAGCGCTTGCATTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGT                                                                                                                                                           <  7:40002/149‑1
CCCGACAGCGCTGGCATTGCCAGTCGCACATCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGT                                                                                                                                                           <  4:178932/149‑1
 CCGCCAGCGCTGGCATTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTG                                                                                                                                                          <  6:208936/149‑1
                TTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGGTTTGTCGCA                                                                                                                                           >  8:208537/1‑149
                                                                    CTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCAC                                                                                       <  7:208537/149‑1
                                                                                                          TGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACTGAAATAC                                                                               <  5:221121/119‑1
                                                                                                          TGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACTGAAATAC                                                                               >  6:221121/1‑119
                                                                                                                                                    TGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACTGAAATACACCAGTACACCTCAGCATCTGTACCGCTTGCCAGACTTTACGGCGATTGATGCGCCAGGCCTGGTCTGGA         <  2:68912/147‑1
                                                                                                                                                    TGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACTGAAATACACCAGTACACCTCAGCATCTGTACCGCTTGCCAGACTTTACGGCGATTGATGCGCCAGGCCTGGTCTGGA         <  3:256629/147‑1
                                                                                                                                                    TGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACTGAAATACACCAGTACACCTCAGCATCTGTACCGCTTGCCAGACTTTACGGCGATTGATGCGCCAGGCCTGGTCTGGA         <  6:196474/147‑1
                                                                                                                                                    TGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACTGAAATACACCAGTACACCTCAGCATCTGTACCGCTTGCCAGACTTTACGGCGATTGATGCGCCAGGCCTGGTCTGGA         <  6:9794/147‑1
                                                                                                                                                     GGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACTGAAATACACCAGTACACCTCAGCATCTGTACCGCTTGCCAGACTTTACGGCGATTGATGCGCCAGGCCTGGTCTGGAGCG      >  5:16689/1‑149
                                                                                                                                                          GGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACTGAAATACACCAGTACACCTCAGCATCTGTACCGCTTGCCAGACTTTACGGCGATTGATGCGCCAGGCCTGGTCTGGAGCGCCCG  >  4:47009/1‑148
                                                                                                                                                                                                                                                                                                              
CCCGCCAGCGCTGGCATTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1558321‑1558475
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcaggGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACTGAAATACACCAGTACACCTCAGCATCTGTACCGCTTGCCAGACTTTACGGCGATTGATGCGCCAGGCCTGGTCTGGAGCGCCCG  <  NC_002947/1558529‑1558383

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.