New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1558475	40 (0.950)	4 (0.100)	4/242	NT	8.4%	coding (426/732 nt)	PP_1369	hypothetical protein
	?	NC_002947	= 1558529	50 (1.260)					coding (372/732 nt)	PP_1369	hypothetical protein

CGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGCGCCGCATGAAGTAGTCGACGGGGCTGCGCGGTAC  >  NC_002947/1558383‑1558672                                                                                                                                                    |                                                                                                                                                cGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACc                                                                                                                                                >  4:47009‑M2/1‑147 (MQ=255)     cgcTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACcctgcc                                                                                                                                           >  5:16689‑M2/1‑143 (MQ=255)        tCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACcctgcca                                                                                                                                          <  2:68912‑M2/147‑8 (MQ=255)        tCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACcctgcca                                                                                                                                          <  6:196474‑M2/147‑8 (MQ=255)        tCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACcctgcca                                                                                                                                          <  3:256629‑M2/147‑8 (MQ=255)        tCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACcctgcca                                                                                                                                          <  6:9794‑M2/147‑8 (MQ=255)            gACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGc                                                                                                                                     >  6:4761/1‑148 (MQ=255)                  gCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCtt                                                                                                                              >  8:172983/1‑149 (MQ=255)                   ccTGGAGCATCATTCCCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTTGCATGCGGCAGAGCTCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTg                                                                                                                             <  3:227532/149‑1 (MQ=255)                       gcgcATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTcc                                                                                                                         >  4:52115/1‑149 (MQ=255)                         gcATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTgg                                                                                                                            >  7:57890/1‑144 (MQ=255)                         gcATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTgg                                                                                                                            <  8:57890/144‑1 (MQ=255)                         gcATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTc                                                                                                                       <  5:161565/149‑1 (MQ=255)                              aaTCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGaa                                                                                                                    >  8:10792/1‑147 (MQ=255)                              aaTCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAAc                                                                                                                   <  8:142086/148‑1 (MQ=255)                               aTCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAg                                                                                                                 >  7:181992/1‑149 (MQ=255)                                  gCCGTACAGTCTGGCCAGCGGGACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGCGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGc                                                                                                              <  6:193445/149‑1 (MQ=255)                                           gcTGCCAAGCGGTACAGATCCTGAGGTGTACTGGCGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACACTGCCAGGCcctc                                                                                                     <  6:54029/148‑1 (MQ=255)                                             tGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTc                                                                                                                       <  2:103905/129‑1 (MQ=255)                                             tGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTc                                                                                                                       >  1:103905/1‑129 (MQ=255)                                              ggCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTGTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAg                                                                                                           >  1:48040/1‑141 (MQ=255)                                              ggCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAg                                                                                                           <  2:48040/140‑1 (MQ=255)                                                  aGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCGGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGc                                                                                              <  4:73098/149‑1 (MQ=255)                                                                   ggTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGtt                                                                             <  7:10792/149‑1 (MQ=255)                                                                   ggTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGtt                                                                             <  1:12445/149‑1 (MQ=255)                                                                    gtgtACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTtc                                                                            >  7:217518/1‑149 (MQ=255)                                                                            gtgtATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAg                                                                    >  7:156221/1‑149 (MQ=255)                                                                             tgtATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAgg                                                                   <  8:156221/149‑1 (MQ=255)                                                                              gtATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACcctgccactgaaatacaccagtacacctcagcatctgtaccgcttgcca                                                                                                <  5:221121‑M2/119‑50 (MQ=255)                                                                              gtATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACcctgccactgaaatacaccagtacacctcagcatctgtaccgcttgcca                                                                                                >  6:221121‑M2/1‑70 (MQ=255)                                                                                 tt‑tCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTg                                                                >  4:252628/1‑148 (MQ=255)                                                                                    tCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTa                                                              <  7:172983/148‑1 (MQ=255)                                                                                       gTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACcctgccactgaaatacaccagtacacctcagcatctgtaccgcttgccagactttacggcgattgatgcgccaggcctggtctggag                                                          <  7:208537‑M2/149‑88 (MQ=255)                                                                                            aGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCGTCGAACAGTGCCAGGCCCTCCGGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGcc                                                     >  3:192896/1‑149 (MQ=255)                                                                                             ggcggcACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTa                                                              >  1:81014/1‑139 (MQ=255)                                                                                             ggcggcACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTa                                                              <  2:81014/139‑1 (MQ=255)                                                                                                 gcACAGCGCTTGCCTCGTGCCCTGGCTCATGAGCCAGGCCGTTTCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCAt                                                <  5:196474/149‑1 (MQ=255)                                                                                                   acaGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATgg                                              >  5:81189/1‑149 (MQ=255)                                                                                                   acaGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATgg                                              <  3:252628/149‑1 (MQ=255)                                                                                                     aGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAgg                                                                                                          >  5:85791/1‑87 (MQ=255)                                                                                                     aGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAgg                                                                                                          <  6:85791/87‑1 (MQ=255)                                                                                                       cgcTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGta                                           >  5:126572/1‑148 (MQ=255)                                                                                                             ccGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATg                                     <  6:126572/148‑1 (MQ=255)                                                                                                                       tGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGCGCCGCATg                            >  5:7686/1‑147 (MQ=255)                                                                                                                       tGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGCGCCGCATg                            >  6:51266/1‑147 (MQ=255)                                                                                                                         gCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGCGCCGCATGAagt                        <  5:4761/149‑1 (MQ=255)                                                                                                                         gCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGCGCCGCATGAag                         <  1:68912/148‑1 (MQ=255)                                                                                                                             aTGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATg                                               <  3:176007/122‑1 (MQ=255)                                                                                                                             aTGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATg                                               >  4:176007/1‑122 (MQ=255)                                                                                                                                aGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGCGCCGCATGAagacagcgg                  >  6:260206/1‑141 (MQ=255)                                                                                                                                 gCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGcgcc                                 <  1:244479/132‑1 (MQ=255)                                                                                                                                 gCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGcgcc                                 >  2:244479/1‑132 (MQ=255)                                                                                                                                    aGGGCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGCGCCGCATGAAGTAGTCGACgggg             >  2:171697/1‑149 (MQ=255)                                                                                                                                    aGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGCGCCGCATGAAGTAGTCGACgggg             <  6:81189/149‑1 (MQ=255)                                                                                                                                    aGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGCGCCGCATGAAGTAGTCGACgggg             <  5:9794/149‑1 (MQ=255)                                                                                                                                         ggTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGCGCCGCATGAAGTAGTCGACGGGGCTgcg        <  3:52115/149‑1 (MQ=255)                                                                                                                                         ggTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGCGCCGCATGAAGTAGTCGACGGGGCTgcg        <  8:181992/149‑1 (MQ=255)                                                                                                                                           tGCGACAAACcctgccactgaaatacaccagtacacctcagcatctgtaccgcttgccagactttacggcgattgatgcgccaggcctggtctggagcgcccggagcgcatggcgtcgcaaactgtcccgcacgctgtgcgactggcaa      >  8:208537‑M2/1‑10 (MQ=255)                                                                                                                                           tGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGTGCCGCATGAAGTAGTCGACGGGGCTGcgcg      <  4:256629/149‑1 (MQ=255)                                                                                                                                              gACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGCGCCGCATGAAGTAGTCGACGGGGCTGCGCGGTa   >  2:186278/1‑149 (MQ=255)                                                                                                                                               aCAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGCGCCGCATGAAGTAGTCGACGGGGCTGCGCGGTAc  >  6:256497/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                CGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATT‑TCAGTGGCAGGCGGCACAGCGCTTGCCGCGTGCCCTGGCTCATGAGCCAGGCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGCGCCGCATGAAGTAGTCGACGGGGCTGCGCGGTAC  >  NC_002947/1558383‑1558672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.