| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1763785 | 26 (0.620) | 4 (0.100) | 4/252 | NT | 11.4% | coding (127/369 nt) | PP_1572 | hypothetical protein |
| ? | NC_002947 | = 1763828 | 37 (0.900) | coding (170/369 nt) | PP_1572 | hypothetical protein | |||||
CAGCGAAAAAGGCAGCACGCTCATGACACCACCAATTGTGCAGGCCTGCCTGCAGAGCCCTGCCGTGACAGCGCTGCTTGGCGTCGGCACCGGCATGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1763637‑1763785‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggCCCGTCAGGTAGTTCTCGGGACTGCCGCTGACGACCTGCCAGACCGCATATGGCTTGGCCACGCCCTGCTCTGCCTCCCCAAACGAGTAGAGACGCATGCCGGTGCCGACGCCAAGCAGCGCTGTCACGGCAGGGCTCTGCAGGCAG < NC_002947/1763828‑1763682 CAGCGAAAACGGCAGCACGCTCATGACACCACCAATTGTGCAGGCCTGCCTGCAGAGCCCTGCCGTGACAGCGCTGCTTGGCGTCGGCACCGGCATGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCG < 8:93771/148‑1CAGCGAAAAAGGCAGCACGCTCATGACACCACCAATTGTGCAGGCCTGTCTGCAGAGCCCTGCCGTGACCGCGCTGCTTGGCGTCGGCACCCGCATGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGG > 7:125717/1‑149 CACCAATTGTGCAGGCCTGCCTGCAGAGCCCTGCCGTGACAGCGCTGCTTGGCGTCGGCACCGGCATGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGCCCGTCAGGTAGTTCTCGGGACTGCCGCT > 8:37443/1‑149 CAGAGCCCTGCCGTGACAGCGCTGCTTGGCGTCGGCACCGGCATGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGCCCGTCAGGTAGTTCTCGGGACTGCCGCTGACGACCTGCCAGACCGCATATG < 7:37443/149‑1 GTCGGCACCGGCATGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGCCCGTCAGGTAGTTCTCGGGACTGCCGCTGACGACCTGCCAGACCGCATATGGCTTG > 5:166774/1‑124 GTCGGCACCGGCATGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGCCCGTCAGGTAGTTCTCGGGACTGCCGCTGACGACCTGCCAGACCGCATATGGCTTG < 6:166774/124‑1 GGCCCGTCAGGTAGTTCTCGGGACTGCCGCTGATGACCTGCCAGACCGCATATGGCTTGGCCACGCCCTGCTCTGCCTCCCCAAACGAGTAGAGACGCATGCCGGTGCCGACGCCAAGCAGCGCTGTCACGGCAGGGCTCTGCAGGCAG < 6:132798/149‑1 CAGCGAAAAAGGCAGCACGCTCATGACACCACCAATTGTGCAGGCCTGCCTGCAGAGCCCTGCCGTGACAGCGCTGCTTGGCGTCGGCACCGGCATGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1763637‑1763785‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggCCCGTCAGGTAGTTCTCGGGACTGCCGCTGACGACCTGCCAGACCGCATATGGCTTGGCCACGCCCTGCTCTGCCTCCCCAAACGAGTAGAGACGCATGCCGGTGCCGACGCCAAGCAGCGCTGTCACGGCAGGGCTCTGCAGGCAG < NC_002947/1763828‑1763682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |