New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1763785	26 (0.620)	4 (0.100)	4/252	NT	11.4%	coding (127/369 nt)	PP_1572	hypothetical protein
	?	NC_002947	= 1763828	37 (0.900)					coding (170/369 nt)	PP_1572	hypothetical protein

CTGCCTGCAGAGCCCTGCCGTGACAGCGCTGCTTGGCGTCGGCACCGGCATGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAGTTGGACGCCTACGTCACCCGCTGGGGCGCTGAAGGTC  >  NC_002947/1763682‑1763965                                                                                                                                                   |                                                                                                                                          ctgcctgcAGAGCCCTGCCGTGACAGCGCTGCTTGGCGTCGGCACCGGCATGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGTCTGGCAGGTCATCAGCGGCAGTCCCGAGAACTACCTGACGGGcc                                                                                                                                         <  6:132798‑M2/149‑3 (MQ=255)           agCCCTGCCGTGACAGCGCTGCTTGGCGTCGGCACCGGCATGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGt                                                                                                                               <  4:47629/149‑1 (MQ=255)                    gTGACAGCGCTGCTTGGCGTCGGCACCGGCATGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGt                                                                                                                      >  7:105009/1‑149 (MQ=255)                    gTGACAGCGCTGCTTGGCGTCGGCACCGGCATGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGt                                                                                                                      <  4:111813/149‑1 (MQ=255)                        cAGCGCTGCTTGGCGTCGGCACCGGCATGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGa                                                                                                                                  >  3:170918/1‑133 (MQ=255)                        cAGCGCTGCTTGGCGTCGGCACCGGCATGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGa                                                                                                                                  <  4:170918/133‑1 (MQ=255)                                          gCACCGGCATGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGCGCGTGGCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTAc                                                                                                <  5:232518/149‑1 (MQ=255)                                                  aTGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCcaccac                                                                                        >  8:104363/1‑149 (MQ=255)                                                      gTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGc                                                                                    <  8:138934/149‑1 (MQ=255)                                                          ctACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCg                                                                                                                             <  2:92539/104‑1 (MQ=255)                                                          ctACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCg                                                                                                                             >  1:92539/1‑104 (MQ=255)                                                              tCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGc                                                                            >  1:75836/1‑149 (MQ=255)                                                                 tttGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCg                                                                         >  5:93116/1‑149 (MQ=255)                                                                            agagCAGGGCGTTGCCAAGGCTTATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCGGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTGGGCAGGTCCGTg                                                              <  2:75836/149‑1 (MQ=255)                                                                                     cGTGGCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGc                                                                                    >  8:125936/1‑118 (MQ=255)                                                                                     cGTGGCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGc                                                                                    <  7:125936/118‑1 (MQ=255)                                                                                      gTGGCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCg                                                    >  5:193138/1‑149 (MQ=255)                                                                                         gCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGa                                                 <  4:212848/149‑1 (MQ=255)                                                                                           cAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGccgcatatggcttggccacgccctgctctgcctccccaaacgagtagagacgcatgccggtgccgac                                                                        >  5:166774‑M2/1‑57 (MQ=255)                                                                                           cAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGccgcatatggcttggccacgccctgctctgcctccccaaacgagtagagacgcatgccggtgccgac                                                                        <  6:166774‑M2/124‑68 (MQ=255)                                                                                           cAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGAcg                                               >  7:241814/1‑149 (MQ=255)                                                                                                cATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGccgcatatggcttggccacgccctgctctgcctccccaaacgagtagagacgcatgccggtgccgacgccaagcagcgctgtcacggcagggctctg                                          <  7:37443‑M2/149‑98 (MQ=255)                                                                                                    tGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAg                                       <  8:35227/148‑1 (MQ=255)                                                                                                      cGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAgg                                                                                                           >  2:40353/1‑78 (MQ=255)                                                                                                      cGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAGtt                                     <  6:93116/148‑1 (MQ=255)                                                                                                      cGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAGTTg                                    >  3:95412/1‑149 (MQ=255)                                                                                                           tGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTGGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCAt                                                       <  4:7223/125‑1 (MQ=255)                                                                                                           tGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCAt                                                       >  3:7223/1‑125 (MQ=255)                                                                                                           tGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAGTTGGACGc                               >  6:21541/1‑149 (MQ=255)                                                                                                                 gtcgtcAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAGTTGGACGCCTACGt                         >  4:126654/1‑149 (MQ=255)                                                                                                                       aGCGGCAGTCCCGAGAACTACCTGACGGGccgcatatggcttggccacgccctgctctgcctccccaaacgagtagagacgcatgccggtgccgacgccaagcagcgctgtcacggcagggctctgcaggcaggcctgcacaattggtg                   >  8:37443‑M2/1‑29 (MQ=255)                                                                                                                       aGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAGTTGGACGCCTACGTCAccc                    <  7:104363/148‑1 (MQ=255)                                                                                                                         cGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAGTTGGACGCCTAc                           <  2:240505/139‑1 (MQ=255)                                                                                                                         cGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAGTTGGACGCCTAc                           >  1:240505/1‑139 (MQ=255)                                                                                                                          ggCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAGTTGGACGCCTACGTCACCCGCTg                <  3:126654/149‑1 (MQ=255)                                                                                                                            cAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTCACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAGTTGGACGCCTACGTCACCCGCTggg              <  8:105009/149‑1 (MQ=255)                                                                                                                                   gagaACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAg                                       >  2:39145/1‑117 (MQ=255)                                                                                                                                   gagaACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAg                                       <  1:39145/117‑1 (MQ=255)                                                                                                                                    agaACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAGTTGGACGCCTACGTCACCCGCTGGGGCGCTGaa      <  4:95412/149‑1 (MQ=255)                                                                                                                                        cTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAGTTGGACGCCTACGTCACCCGCTGGGGCGCTGAAggac  >  2:24977/1‑147 (MQ=255)                                                                                                                                           ccTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAg                                       <  4:27094/109‑1 (MQ=255)                                                                                                                                           ccTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAg                                       >  3:27094/1‑109 (MQ=255)                                                                                                                                                   |                                                                                                                                          CTGCCTGCAGAGCCCTGCCGTGACAGCGCTGCTTGGCGTCGGCACCGGCATGCGTCTCTACTCGTTTGGGGAGGCAGAGCAGGGCGTGGCCAAGCCATATGCGGTCTGGCAGGTCGTCAGCGGCAGTCCCGAGAACTACCTGACGGGCCGTCCTGATGTCGACAACGTGACCTTGCAGGTCGACGTGTACGCCACCACGGGCGACTCAGCTCGGCAGGTCCGTGACGCCATCCGTGACGCGATCGAGTTGGACGCCTACGTCACCCGCTGGGGCGCTGAAGGTC  >  NC_002947/1763682‑1763965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.