New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2074972 =	49 (1.160)	3 (0.080)	3/244	NT	6.2%	coding (407/1188 nt)	ygaY	transporter YgaY
	?	NC_002947	2075028 =	44 (1.100)					coding (351/1188 nt)	ygaY	transporter YgaY

GGGCCTGGTCATCAGCGCCTGTGCACCCAGCCTGCCCTGGCTGCTGCTCGGCACGGCGCTGACCGGGCTGTTCTCGGTGGTGGCACAGATCCTCGTGCCGATGGCAGCGACCCTGAGTGAGCCCCATCAGCGTGGGCGCGCGGTCGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2075121‑2074972 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcacGAGGATCTGTGCCACCACCGAGAACAGCCCGGTCAGCGCCGTGCCGAGCAGCAGCCAGGGCAGGCTGGGTGCACAGGCGCTGATGACCAGGCCCAGGGTGGAGACAACGGTCATCATGGTAATCAGCCGGCGCTGCTCGAACAG  >  NC_002947/2075028‑2075171                                                                                                                                                                                                                                                                                                        GGGCCTGGTCATCAGCGCCTGTGCACCCAGCCTGCCCTGGCTGCTGCTCGGCACGGCGCTGACCGGGCTGTTCTCGGTGGTGGCACAGATCCTCGTGCCGATGGCAGCGACCCTGAGTGAGCCCCATCAGCGTGGGCGCGCGGTCGGCA                                                                                                                                                   >  3:222597/1‑149                                                                                                TGCCGATGGCAGCGACCCTGAGTGAGCCCCATCAGCGTGGGCGCGCGGTCGGCACGAGGATCTGTGCCACCACCGAGAACAGCCCGGTCAGCGCCGTGCCGAGCAGCAGCCAGGGCAGGCTGGGTGCACAGGCGCTGATGACCAGGCCC                                                    >  8:79473/1‑149                                                                                                 GCCGATGGCAGCGACCCTGAGTGAGCCCCATCAGCGTGGGCGCGCGGTCGGCACGAGGATCTGTGCCACCACCGAGAACAGCCCGGTCAGCGCCGTGCCGAGCAGCAGCCAGGGCAGGCTGGGTGCACAGGCGCTGATGACCAGGCC                                                     >  3:241301/1‑147                                                                                                        GCAGCGACCCTGAGTGAGCCCCATCAGCGTGGGCGCGCGGTCGGCACGAGGATCTGTGCCACCACCGAGAACAGCCCGGTCAGCGCCGTGCCGAGCAGCAGCCAGGGCAGGCTGGGTGCACAGGCGCTGATGACCAGGCCCAGGGTGGA                                            <  4:241301/149‑1                                                                                                                                                TCGGCACGAGGATCTGTGCCACCACCGAGAACAGCCCGGTCAGCGCCGTGCCGAGCAGCAGCCAGGGCAGGCTGGGTGCACAGGCGCTGATGACCAGGCCCAGGGTGGAGACAACGGTCATCATGGTAATCAGCCGGCGCTGCTCGAA     >  4:192080/1‑148                                                                                                                                                  GGCACGAGGATCTGTGCCACCACCGAGAACAGCCCGGTCAGCGCCGTGCCGAGCAGCAGCCAGGGCAGGCTGGGTGCACAGGCGCTGATGACCAGGCCCAGGGTGGAGACAACGGTTATCATGGTAATCAGCCGGCGCTGCTCGAACAG  >  5:228888/1‑149                                                                                                                                                   GCACGAGGATCTGTGCCACCACCGAGAACAGCCCGGTCAGCGCCGTGCCGAGCAGCAGCCAGGGCAGGCTGGGTGCACAGGCGCTGATGACCAGGCCCAGG                                                 >  4:180451/1‑101                                                                                                                                                                                                                                                                                                        GGGCCTGGTCATCAGCGCCTGTGCACCCAGCCTGCCCTGGCTGCTGCTCGGCACGGCGCTGACCGGGCTGTTCTCGGTGGTGGCACAGATCCTCGTGCCGATGGCAGCGACCCTGAGTGAGCCCCATCAGCGTGGGCGCGCGGTCGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2075121‑2074972 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcacGAGGATCTGTGCCACCACCGAGAACAGCCCGGTCAGCGCCGTGCCGAGCAGCAGCCAGGGCAGGCTGGGTGCACAGGCGCTGATGACCAGGCCCAGGGTGGAGACAACGGTCATCATGGTAATCAGCCGGCGCTGCTCGAACAG  >  NC_002947/2075028‑2075171

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.