| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2254672 = | 54 (1.280) | 3 (0.080) | 3/240 | NT | 6.4% | coding (991/1083 nt) | leuB | 3‑isopropylmalate dehydrogenase |
| ? | NC_002947 | 2254723 = | 38 (0.970) | coding (1042/1083 nt) | leuB | 3‑isopropylmalate dehydrogenase | |||||
TCGCAACTACACCTTTGCTAAAAGTGGGCCGCCACCGGGAATTTTGGGGGGCGGGCCAGAGAGATTACAGATTCCGCAGCGCTGCGACTACTGCGTCGCCCATTTCCTGCGTACCAACTTTGCGGCAGCCTTCCGAGAAGATGTCGCCGGTACGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2254828‑2254672‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtacgcagGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGATGAAACGTGTAGGTCTGATCGGTTGGCGCGGTATGGTCGGT > NC_002947/2254723‑2254869 TCGCAACTACACCTTTGCTAAAAGTGGGCCGCCACCGGGAATTTTGGGGGGCGGGCCAGAGAGATTACAGCTTCCGCAGCGCTGCGACTACTTCGTCGCCCATTTCCTGCGTACCAACTTTGCGGCAGCCTTCCGAGAAGATGTCGCCG > 7:234453/1‑149TCGCAACTACACCTTTGCTAAAAGTGGGCCGCCACCGGGAATTTTGGGGGGCGGGCCAGAGAGATTACAGATTCCGCAGCGCTGCGACTACTGCGTCGCCCATTTCCTGCGTACCAACTTTGCGGCAGCCTTCCGAGAAGATGTCGCCG < 1:33843/149‑1 TACACCTTTGCTAAAAGTGGGCCGCCACCGGGAATTTTGGGGGGCGGGCCAGAGAGATTACAGATTCCGCAGCGCTGCGACTACTGCGTCGCCCATTTCCTGCGTACCAACTTTGCGGCAGCCTTCCGAGAAGATGTCGCCGGTACG > 7:61403/1‑147 TAAAAGTGGGCCGCCACCGGGAATTTTGGGGGGCGGGCCAGAGAGATTACAGATTCCGCAGCGCTGCGACTACTGCGTCGCCCATTTCCTGCGTACCAACTTTGCGGCAGCCTTCCGAGAAGATGTCGCCGGTACGCA > 5:150945/1‑138 TAAAAGTGGGCCGCCACCGGGAATTTTGGGGGGCGGGCCAGAGAGATTACAGATTCCGCAGCGCTGCGACTACTGCGTCGCCCATTTCCTGCGTACCAACTTTGCGGCAGCCTTCCGAGAAGATGTCGCCGGTACGCA < 6:150945/138‑1 CCTGCGTACCAACTTTGCGGCAGCCTTCCGAGAAGATGTCGCCGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTG > 8:43201/1‑149 CGTACCAACTTTGCGGCAGCCTTCCGAGAAGATGTCGCCGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCC > 1:16706/1‑118 CGTACCAACTTTGCGGCAGCCTTCCGAGAAGATGTCGCCGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCC < 2:16706/118‑1 CGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGATGAAACGTGTAGGTCTGATCGGTTGGCGCGGTATGGTC < 5:45354/149‑1 GCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGATGAAACGTGTAGGTCTGATCGGTTGGCGCGGTATGGTCG > 6:176781/1‑149 AGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGATGAAACGTGTAGGTCTGATCGGTTGGCGCGGTATGGTCGGT > 4:224607/1‑149 TCGCAACTACACCTTTGCTAAAAGTGGGCCGCCACCGGGAATTTTGGGGGGCGGGCCAGAGAGATTACAGATTCCGCAGCGCTGCGACTACTGCGTCGCCCATTTCCTGCGTACCAACTTTGCGGCAGCCTTCCGAGAAGATGTCGCCGGTACGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2254828‑2254672‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtacgcagGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGATGAAACGTGTAGGTCTGATCGGTTGGCGCGGTATGGTCGGT > NC_002947/2254723‑2254869 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |