New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2254672 =	54 (1.280)	3 (0.080)	3/240	NT	6.4%	coding (991/1083 nt)	leuB	3‑isopropylmalate dehydrogenase
	?	NC_002947	2254723 =	38 (0.970)					coding (1042/1083 nt)	leuB	3‑isopropylmalate dehydrogenase

CATCCTGTCGGTGTCGATGATGTTGCGTTACAGCTTCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGATGAAACGTGTAGGTCTGATCGGTTGGCGCGGTATGGTCGGT  >  NC_002947/2254575‑2254869                                                                                                                                                     |                                                                                                                                                   cacctttgctaaaagtgggccgccaccgggaattttggggggcgggccagagagattacagattccgcagcgctgcgactactgcgtcgcccatttcCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAgg                                                                                                                                                    >  8:43201‑M1/98‑149 (MQ=255)    ccTGTCGGTGTCGATGATGTTGCGTTACAGCTTCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGaaa                                                                                                                                                 >  7:3047/1‑149 (MQ=255)        tCGGTGTCGATGATGTTGCGTTACAGCTTCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATgg                                                                                                                                              <  1:130039/148‑1 (MQ=255)        tCGGTGTCGATGATGTTGCGTTACAGCTTCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATgg                                                                                                                                              <  6:108036/148‑1 (MQ=255)        tCGGTGTCGATGATGTTGCGTTACAGCTTCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATgg                                                                                                                                              <  6:103876/148‑1 (MQ=255)        tCGGTGTCGATGATGTTGCGTTACAGCTTCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATgg                                                                                                                                              <  2:134157/148‑1 (MQ=255)        tCGGTGTCGATGATGTTGCGTTACAGCTTCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATgg                                                                                                                                              <  1:42937/148‑1 (MQ=255)          ggTGTCGATGATGTTGCGTTACAGCTTCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGc                                                                                                                                            <  2:101688/148‑1 (MQ=255)               cGATGATGTTGCGTTACAGCTTCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACg                                                                                                                                        >  8:7873/1‑147 (MQ=255)                  tgatgTTGCGTTACAGCTTCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCagta                                                                                                                                   <  6:45596/149‑1 (MQ=255)                  tgatgTTGCGTTACAGCTTCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCag                                                                                                                                     >  6:19274/1‑147 (MQ=255)                               cAGCTTCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTg                                                                                                                       <  3:109313/148‑1 (MQ=255)                                aGCTTCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCg                                                                                                                     <  7:7873/149‑1 (MQ=255)                                aGCTTCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTAGCAGCGCTGCg                                                                                                                     >  4:121716/1‑149 (MQ=255)                                   ttCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCg                                                                                                                     >  6:224487/1‑146 (MQ=255)                                   ttCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCg                                                                                                                     <  5:224487/146‑1 (MQ=255)                                   ttCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACCCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGaa                                                                                                                  >  8:234453/1‑149 (MQ=255)                                           gTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTaa                                                                                                           >  4:52094/1‑148 (MQ=255)                                                    cgccgAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGgc                                                                                                 >  6:165377/1‑149 (MQ=255)                                                      ccgAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAg                                                                                                                            >  2:10609/1‑120 (MQ=255)                                                      ccgAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAg                                                                                                                            <  1:10609/120‑1 (MQ=255)                                                                 gagaAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCaaaa                                                                                    >  6:45354/1‑149 (MQ=255)                                                                  agaAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAAt                                                                                   >  7:925/1‑149 (MQ=255)                                                                    aaGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTc                                                                                 >  6:66533/1‑149 (MQ=255)                                                                       gCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCg                                                                              <  5:66533/149‑1 (MQ=255)                                                                               ccTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTggcggc                                                                      >  5:174028/1‑149 (MQ=255)                                                                               ccTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGATGGTACGCAGGAAATGGGCCACGCAGTAGTCGCAGCGCAGCGGAATCTGTAATCACTCTGGCCCGCCCCCCCAAAATCCCCGTggcgcc                                                                      >  5:231101/1‑147 (MQ=255)                                                                                cTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGcc                                                                     >  8:55860/1‑149 (MQ=255)                                                                                        ggACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACttt                                                               >  8:61403/1‑147 (MQ=255)                                                                                         gACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACTCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACtttt                                                              <  3:121716/147‑1 (MQ=255)                                                                                         gACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTa                                                             <  5:214263/148‑1 (MQ=255)                                                                                          aCCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGc                                                           <  8:3047/149‑1 (MQ=255)                                                                                           ccAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGc                                                           >  7:117769/1‑148 (MQ=255)                                                                                                 gCTGCGTACCGGCGAGATCTTCTCGGAAGGCTGCCGAAAAGTTTGTACGCAGTAAATGGTCGACGCAGTAGTCGCAGCGCTGCTGAATATGTAATCTCTCTGTCCCGCCCCCCAAAATTCCGGGTGGCGGCCCACTTTTAGCAAAGgtg                                                    <  4:177601/149‑1 (MQ=255)                                                                                                 gCTGCGTACCGGCGAAATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGgtg                                                    <  8:925/149‑1 (MQ=255)                                                                                                 cctgcgtaccaactttgcggcagccttccgagaagatgtcgccggtacgcagGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGgtg                                                    >  8:43201‑M2/53‑149 (MQ=255)                                                                                                   TGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTa                                                             >  5:150945‑M1/1‑138 (MQ=255)                                                                                                   TGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTa                                                             <  6:150945‑M1/138‑1 (MQ=255)                                                                                                     cgtaccaactttgcggcagccttccgagaagatgtcgccggtacgcagGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTccc                                                                               <  2:16706‑M2/70‑1 (MQ=255)                                                                                                     cgtaccaactttgcggcagccttccgagaagatgtcgccggtacgcagGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTccc                                                                               >  1:16706‑M2/49‑118 (MQ=255)                                                                                                     CGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTa                                                  >  7:61403‑M1/1‑147 (MQ=255)                                                                                                          CGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGa                                           <  1:33843‑M1/149‑1 (MQ=255)                                                                                                          CGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGAAGTAGTCGCAGCGCTGCGGAAGCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGa                                           >  7:234453‑M1/1‑149 (MQ=255)                                                                                                           ggCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGAt                                          <  3:52094/149‑1 (MQ=255)                                                                                                              gACATCTTCTCGGAAGGCTGCGGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGATGaa                                       <  6:231101/149‑1 (MQ=255)                                                                                                              gACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGATGaa                                       <  6:174028/149‑1 (MQ=255)                                                                                                                      ctcGGAAGGCTGCCGAAATGTTGGAACCATGTAAAGGGGCGACGATTTAGTCGAAGGGCTCGGTAATCTTAAATCTCCCTGGCCCG‑CCCCCAAAATTACCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGATGAAACGTGTAg                               <  1:17759/148‑1 (MQ=255)                                                                                                                         ggAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGATGAAACGTGTAGGTc                            <  5:165377/149‑1 (MQ=255)                                                                                                                                       aaGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGC‑AAGGTGTAGTTGCGATGAAACGTGTAGGTCTGATCGGTTGGcgcg             >  6:77555/1‑149 (MQ=255)                                                                                                                                           tGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGATGAAACGTGTAGGTCTGATCGGTTGGCGCGGTa          >  8:65090/1‑149 (MQ=255)                                                                                                                                                cgcagGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGATGAAACGTGTAGGTCTGATCGGTTGGCGCGGTATGGTc     <  5:45354‑M2/144‑1 (MQ=255)                                                                                                                                                 gcagGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGATGAAACGTGTAGGTCTGATCGGTTGGCGCGGTATGGTCg    >  6:176781‑M2/5‑149 (MQ=255)                                                                                                                                                   agGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGATGAAACGTGTAGGTCTGATCGGTTGGCGCGGTATGGTCGGt  >  4:224607‑M2/3‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CATCCTGTCGGTGTCGATGATGTTGCGTTACAGCTTCAATCAGTCGGCTGCCGCCGAGGCGATCGAGAAGGCCGTGAGCCTGGTTCTGGACCAGGGGCTGCGTACCGGCGACATCTTCTCGGAAGGCTGCCGCAAAGTTGGTACGCAGGAAATGGGCGACGCAGTAGTCGCAGCGCTGCGGAATCTGTAATCTCTCTGGCCCGCCCCCCAAAATTCCCGGTGGCGGCCCACTTTTAGCAAAGGTGTAGTTGCGATGAAACGTGTAGGTCTGATCGGTTGGCGCGGTATGGTCGGT  >  NC_002947/2254575‑2254869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.