| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2558371 | 37 (0.880) | 4 (0.100) | 4/252 | NT | 10.1% | coding (631/2235 nt) | fepA | ferric enterobactin transport system outer membrane subunit |
| ? | NC_002947 | = 2558394 | 35 (0.850) | coding (654/2235 nt) | fepA | ferric enterobactin transport system outer membrane subunit | |||||
TTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2558301‑2558371‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccACCGAGGTTGAAGTTGGCTCGGCGGCTGGCGC < NC_002947/2558394‑2558363 TTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCACCGAGGTTGAAGTTGGCTCGGCGGCTGGCGC < 7:82218/103‑1TTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCACCGAGGTTGAAGTTGGCTCGGCGGCTGGCGC > 8:82218/1‑103 TGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCACCGAGGTTGAAGTTGGCTCGGCGGC < 5:76913/86‑1 TGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCACCGAGGTTGAAGTTGGCTCGGCGGC > 6:76913/1‑86 TTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2558301‑2558371‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccACCGAGGTTGAAGTTGGCTCGGCGGCTGGCGC < NC_002947/2558394‑2558363 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |