New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2558371	37 (0.880)	4 (0.100)	4/252	NT	10.1%	coding (631/2235 nt)	fepA	ferric enterobactin transport system outer membrane subunit
	?	NC_002947	= 2558394	35 (0.850)					coding (654/2235 nt)	fepA	ferric enterobactin transport system outer membrane subunit

GCGTGGCCCGGCCGCCGCACGCTATGGCTCTGGCGCCATGGGCGGGGTGGTCAACATCATCACCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAG  >  NC_002947/2558229‑2558512                                                                                                                                               |                                                                                                                                              gCGTGGCCCGGCCGCCGCACGCTATGGCTCTGGCGCCATGGGCGGGGTGGTCAACATCATCACCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAg                                                                                                                                         >  2:142729/1‑149 (MQ=255)       cccGGCCGCCGCACGCTATGGCTCTGGCGCCATGGGCGGGGTGGTCAACATCATCACCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACt                                                                                                                                   >  7:43329/1‑149 (MQ=255)        ccGGCCGCCGCACGCTATGGCTCTGGCGCCATGGGCGGGGTGGTCAACATCATCACCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACtt                                                                                                                                  >  5:6507/1‑149 (MQ=255)               ccgcACGCTATGGCTCTGGCGCCATGGGCGGGGTGGTCAACATCATCACCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTc                                                                                                                           <  1:142729/149‑1 (MQ=255)                       tATGGCTCTGGCGCCATGGGCGGGGTGGTCAACATCATCACCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTggcgg                                                                                                                   >  8:240860/1‑149 (MQ=255)                                  cgcCATGGGCGGGGTGGTCAACATCATCACCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGAt                                                                                                         >  3:231390/1‑148 (MQ=255)                                     cATGGGCGGGGTGGTCAACATCATCACCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAAcc                                                                                                     <  8:165339/149‑1 (MQ=255)                                     cATGGGCGGGGTGGTCAACATCATCACCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAAcc                                                                                                     <  8:161442/149‑1 (MQ=255)                                      aTGGGCGGGGTGGTCAACATCATCACCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCt                                                                                                    <  6:6507/149‑1 (MQ=255)                                         ggCGGGGTGGTCAACATCATCACCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTgg                                                                                                  <  4:231390/148‑1 (MQ=255)                                               gtggtCAACATCATCACCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCg                                                                                           >  2:94431/1‑149 (MQ=255)                                                  gtCAACATCATCACCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTGAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCt                                                                                        >  5:233477/1‑149 (MQ=255)                                                     aaCATCATCTCCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCTGCCTGTACACGCAGCTGCCGGTAGTCAGCGCATAGGGCGCCAGCCGCCGAGCCATCTTCAACCTCGGTGGCGTCCTGACGGATAACCTGGGTTTCCGCCTGt                                                                                      <  5:40447/148‑1 (MQ=255)                                                     aaCATCATCACCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTa                                                                                     >  8:71507/1‑149 (MQ=255)                                                        atcatcACCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTAcgg                                                                                  >  7:52510/1‑149 (MQ=255)                                                           atcaCCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTAcggcgg                                                                               >  1:114535/1‑149 (MQ=255)                                                            tcaCCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACggcggc                                                                              <  6:233477/149‑1 (MQ=255)                                                              aCCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCt                                                                            >  3:255002/1‑149 (MQ=255)                                                                      cccTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGa                                                                    <  1:94431/149‑1 (MQ=255)                                                                         ttCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCaccgaggttgaagttggctcggcggctggcgc                                                                                                               <  7:82218‑M1/103‑33 (MQ=255)                                                                         ttCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCaccgaggttgaagttggctcggcggctggcgc                                                                                                               >  8:82218‑M1/1‑71 (MQ=255)                                                                         ttCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACt                                                                  >  4:54646/1‑148 (MQ=255)                                                                            cgacgaGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGAc                                                               <  7:240860/148‑1 (MQ=255)                                                                                    tGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCaccgaggttgaagttggctcggcggc                                                                                                                     <  5:76913‑M1/86‑27 (MQ=255)                                                                                    tGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCaccgaggttgaagttggctcggcggc                                                                                                                     >  6:76913‑M1/1‑60 (MQ=255)                                                                                       aaGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTg                                                   <  8:43329/149‑1 (MQ=255)                                                                                          gCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGa                                                 >  4:120331/1‑148 (MQ=255)                                                                                          gCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGa                                                 >  1:263623/1‑148 (MQ=255)                                                                                          gCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGa                                                 <  3:120331/148‑1 (MQ=255)                                                                                               gTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACa                                               <  3:154565/145‑1 (MQ=255)                                                                                               gTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACa                                               >  4:154565/1‑145 (MQ=255)                                                                                                   gCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCGAAGa                                                                    <  6:169991/120‑1 (MQ=255)                                                                                                   gCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGa                                                                    >  5:169991/1‑120 (MQ=255)                                                                                                    ccTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCg                                      <  2:263623/149‑1 (MQ=255)                                                                                                     cTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCgg                                     >  4:117924/1‑149 (MQ=255)                                                                                                       gTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCAAAGACTGACGCCGACGATCTGGACATCAACGCCggg                                    >  4:142137/1‑148 (MQ=255)                                                                                                          cacGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATg                                >  5:230815/1‑149 (MQ=255)                                                                                                             gCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGcca                             <  2:114535/149‑1 (MQ=255)                                                                                                                gCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGccacca                          <  7:71507/149‑1 (MQ=255)                                                                                                                                gcAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAgcggg          >  4:122840/1‑149 (MQ=255)                                                                                                                                       gcgcCAGCCGCCGAGCCAACTTCAACCTCGGTggctggcgccctctgcgctgtcttccggcagctgcgtgtacaggctgacgctgcctttcagctcgtcggaa                                                 <  7:82218‑M2/103‑72 (MQ=255)                                                                                                                                       gcgcCAGCCGCCGAGCCAACTTCAACCTCGGTggctggcgccctctgcgctgtcttccggcagctgcgtgtacaggctgacgctgcctttcagctcgtcggaa                                                 >  8:82218‑M2/1‑32 (MQ=255)                                                                                                                                        cgcCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAg  <  8:52510/149‑1 (MQ=255)                                                                                                                                             gccgccGAGCCAACTTCAACCTCGGTggctggcgccctctgcgctgtcttccggcagctgcgtgtacaggctgacgctgcctttca                                                            >  6:76913‑M2/1‑26 (MQ=255)                                                                                                                                             gccgccGAGCCAACTTCAACCTCGGTggctggcgccctctgcgctgtcttccggcagctgcgtgtacaggctgacgctgcctttca                                                            <  5:76913‑M2/86‑61 (MQ=255)                                                                                                                                               |                                                                                                                                              GCGTGGCCCGGCCGCCGCACGCTATGGCTCTGGCGCCATGGGCGGGGTGGTCAACATCATCACCAAGCGCCCTTCCGACGAGCTGAAAGGCAGCGTCAGCCTGTACACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAG  >  NC_002947/2558229‑2558512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.