New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3529386 =37 (0.880)5 (0.130) 5/244 NT 13.0% coding (1203/3102 nt) dnaEB error‑prone DNA polymerase
?NC_002947 3529437 = 32 (0.800)coding (1254/3102 nt) dnaEB error‑prone DNA polymerase

ACCGCACCGGCGGCATGGTAGGTGTTGACTACCGCAGTGAGCGCCGCCCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3529439‑3529386
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggtgcGGTGCGGGATGTGGCGCGGGCGCTGGGGCTACCTGCCGATCAGGTGGATGCCCTGGCCAAATGTTGTGGTCGCTGGAGCGATCGCATACCCGATGACCAGCGCCTGGCCGAGGCCGGTTTC  >  NC_002947/3529437‑3529557
                                                                                                                                                                               
ACCGCACCGGCGGCATGGTAGGTGTTGACTACCGCAGTGAGCGCCGCCCGGTGCGGTGCGGGATGTGGCGCGGGCGCTGGGGCTACCTGCCGATCAGGTGGATGCCCTGGCCAAATGTTGTGGTCGCTGGAGCGATCGCATACCCGAT                             >  1:189565/1‑148
 CCGCACCGGCGGCATGGTAGGTGTTGACTACCGCAGTGAGCGCCGCCCGGTGCGGTGCGGGATGTGGCGCGGGCGCTGGGGCTACCTGCCGATCAGGTGGATGCCCTGGCCAAATGTTGT                                                        <  5:31216/120‑1
 CCGCACCGGCGGCATGGTAGGTGTTGACTACCGCAGTGAGCGCCGCCCGGTGCGGTGCGGGATGTGGCGCGGGCGCTGGGGCTACCTGCCGATCAGGTGGATGCCCTGGCCAAATGTTGT                                                        >  6:31216/1‑120
      CCGGCGGCATGGTAGGTGTTGACTACCGCAGTGAGCGCCGCCCGGTGCGGTGCGGGATGTGGCGCGGGCGCTGGGGCTACCTGCCGATCAGGTGGATGCCCTGGCCAAATGTTGTGGTCGCTGGAGCGATCGCATACCCGATGACCAGC                      >  1:104559/1‑149
                           ACTACCGCAGTGAGCGCCGCCCGGTGCGGTGCGGGATGTGGCGCGGGCGCTGGGGCTACCTGCCGATCAGGTGGATGCCCTGGCCAAATGTTGTGGTCGCTGGAGCGATCGCATACCCGATGACCAGCGCCTGGCCGAGGCCGGTTTC  <  2:189565/148‑1
                                                                                                                                                                               
ACCGCACCGGCGGCATGGTAGGTGTTGACTACCGCAGTGAGCGCCGCCCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3529439‑3529386
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggtgcGGTGCGGGATGTGGCGCGGGCGCTGGGGCTACCTGCCGATCAGGTGGATGCCCTGGCCAAATGTTGTGGTCGCTGGAGCGATCGCATACCCGATGACCAGCGCCTGGCCGAGGCCGGTTTC  >  NC_002947/3529437‑3529557

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.