| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3667005 = | 41 (0.970) | 5 (0.130) | 3/240 | NT | 12.6% | coding (641/693 nt) | PP_3230 | phosphoribosyl transferase domain‑containing protein |
| ? | NC_002947 | 3667054 = | 31 (0.790) | coding (690/693 nt) | PP_3230 | phosphoribosyl transferase domain‑containing protein | |||||
GAGCGTCTGCTACGTATTGATTGCGGGCGCTCAGACGCCCGCCACGAGTTCGACGCCTGCCAGCTTCATCGTCTGTGTGCGAACTTCAACCCTGTGCTCAGTCATGGGGCGCCCTCCGGCAAAGCGCTTGCTGATCGGCCTGCCCCATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3667154‑3667005‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccatgaCTGAGCACAGGGTTGAAGTTCGCACACAGACGATGAAGCTGGCAGGCGTCGAACTCGTGGCGGGCGTCTGAGCGCCCGCAATCAATACGTAGCAGACGCTCTCGCGGCACGTGGCCTAAGGTCACTACTCTTCGACCTGCTGAGCT > NC_002947/3667054‑3667199 GAGCGTCTGCTACGTATTGATTGCGGGCGCTCAGACGCCCGCCACGAGTTCGACGCCTGCCAGCTTCATCGTCTGTGTGCGAACTTCAACCCTGTGCTCAGTCATGGGGCGCCCTCCGGCAAAGCGCTTGCTGATCGGCCTGCCCCATG < 7:66097/149‑1 GTCATGGGGCGCCCTCCGGCAAAGCGCTTGCTGATCGGCCTGCCCCATGACTGAGCACAGGGTTGAAGTTCGCACACAGACGATGAAGCTGGCAGGCGTCGAACTCGTGGCGGGCGTCTGAGCGCCCGCAATCAA < 5:278/135‑1 GTCATGGGGCGCCCTCCGGCAAAGCGCTTGCTGATCGGCCTGCCCCATGACTGAGCACAGGGTTGAAGTTCGCACACAGACGATGAAGCTGGCAGGCGTCGAACTCGTGGCGGGCGTCTGAGCGCCCGCAATCAA < 5:4062/135‑1 GTCATGGGGCGCCCTCCGGCAAAGCGCTTGCTGATCGGCCTGCCCCATGACTGAGCACAGGGTTGAAGTTCGCACACAGACGATGAAGCTGGCAGGCGTCGAACTCGTGGCGGGCGTCTGAGCGCCCGCAATCAA > 6:278/1‑135 GTCATGGGGCGCCCTCCGGCAAAGCGCTTGCTGATCGGCCTGCCCCATGACTGAGCACAGGGTTGAAGTTCGCACACAGACGATGAAGCTGGCAGGCGTCGAACTCGTGGCGGGCGTCTGAGCGCCCGCAATCAA > 6:4062/1‑135 ATGGGGCGCCCTCCGGCAAAGCGCTTGCTGATCGGCCTGCCCCATGACTGAGCACAGGGTTGAAGTTCGCACACAGACGATGAAGCTGGCAGGCGTCGAACTCGTGGCGGGCGTCTGAGCGCCCGCAATCAATACGTAGCAGACGCTCT > 1:93786/1‑149 CCCCATGACTGAGCACAGGGTTGAAGTTCGCACACAGACGATGAAGCTGGCAGGCGTCGAACTCGTGGCGGGCGTCTGAGCGCCCGCAATCAATACGTAGCAGACGCTCTCGCGGCACGTGGCCTAAGGTCACTACTCTTCGACCTGCT < 3:159286/149‑1 ATGACTGAGCACAGGGTTGAAGTTCGCACACAGACGATGAAGCTGGCAGGCGTCGAACTCGTGGCGGGCGTCT < 1:133781/73‑1 ATGACTGAGCACAGGGTTGAAGTTCGCACACAGACGATGAAGCTGGCAGGCGTCGAACTCGTGGCGGGCGTCT > 2:133781/1‑73 TGACTGAGCACAGGGTTGAAGTTCGCACACAGACGATGAAGCTGGCAGGCGTCGAACTCGTGGCGGGCGTCTGAGCGCCCGCAATCAATACGTAGCAGACGCTCTCGCGGCACGTGGCCTAAGGTCACTACTCTTCGACCTGCTGAGCT < 4:148034/149‑1 GAGCGTCTGCTACGTATTGATTGCGGGCGCTCAGACGCCCGCCACGAGTTCGACGCCTGCCAGCTTCATCGTCTGTGTGCGAACTTCAACCCTGTGCTCAGTCATGGGGCGCCCTCCGGCAAAGCGCTTGCTGATCGGCCTGCCCCATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3667154‑3667005‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccatgaCTGAGCACAGGGTTGAAGTTCGCACACAGACGATGAAGCTGGCAGGCGTCGAACTCGTGGCGGGCGTCTGAGCGCCCGCAATCAATACGTAGCAGACGCTCTCGCGGCACGTGGCCTAAGGTCACTACTCTTCGACCTGCTGAGCT > NC_002947/3667054‑3667199 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |