| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3723177 | 46 (1.090) | 5 (0.120) | 5/252 | NT | 11.4% | coding (434/927 nt) | PP_3288 | universal stress protein family protein |
| ? | NC_002947 | = 3723224 | 33 (0.800) | coding (481/927 nt) | PP_3288 | universal stress protein family protein | |||||
GCCCTTGAATGAGATCCTGATACACTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3723028‑3723177‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtCCACCGCCGCCAGAACCCTGCGTGGCAACGCATGGCTGGCCTTGTGTACCAGGTGCAAGGGTATTCGCGTTTCGCGCAGCAACTGGATATCCAGCGAAGTGAACATTGCGCGCATCCACCAAGGCTCATGCTCGAGCTCTTTGATCAG < NC_002947/3723224‑3723077 GCCCTTGAATGAGATCCTGATACACTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGG < 8:68920/149‑1 TGATACACTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGG < 7:6808/132‑1 TGATACACTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGG > 8:6808/1‑132 TGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTCCACCGCCGCCAGAACCCTGCGTGGCAACGCATGGCTGGCCTTGTGTAC > 4:242097/1‑149 ATCACAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTCCACCGCCGCCAGAACCCTGCGTGGCAACGCATGGCTGGCCTTGTGTACCA < 4:159331/149‑1 AAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTCCACCGCCGCCAGAACCCTGCGTGGCAACGCATGGCTGGCCTTGTGTACCAGGT < 3:242097/149‑1 TTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTCCACAGCCGCCAGAACCCTGCGTGGCAACGCATGGCTGGCCTTGTGTACCAG > 3:261534/1‑127 TTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTCCACAGCCGCCAGAACCCTGCGTGGCAACGCATGGCTGGCCTTGTGTACCAG < 4:261534/127‑1 GTCCACCGCCGCCAGAACCCTGCGTGGCAACGCATGGCTGGCCTTGTGTACCAGGTGCAAGGGTATTCGCGTTTCGCGCAGCAACTGGATATCCAGCGAAGTGAACATTGCGCGCATCC > 3:108288/1‑119 GTCCACCGCCGCCAGAACCCTGCGTGGCAACGCATGGCTGGCCTTGTGTACCAGGTGCAAGGGTATTCGCGTTTCGCGCAGCAACTGGATATCCAGCGAAGTGAACATTGCGCGCATCC < 4:108288/119‑1 TCCACCGCCGCCAGAACCCTGCGTGGCAACGCATGGCTGGCCTTGTGTACCAGGTGCAAGGGTATTCGCGTTTCGCGCAGCAACTGGATATCCAGCGAAGTGAACATTGCGCGCATCCACCAAGGCTCATGCTCGAGCTCTTTGATCAG > 4:29645/1‑149 GCCCTTGAATGAGATCCTGATACACTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3723028‑3723177‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtCCACCGCCGCCAGAACCCTGCGTGGCAACGCATGGCTGGCCTTGTGTACCAGGTGCAAGGGTATTCGCGTTTCGCGCAGCAACTGGATATCCAGCGAAGTGAACATTGCGCGCATCCACCAAGGCTCATGCTCGAGCTCTTTGATCAG < NC_002947/3723224‑3723077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |