New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4056575 | 26 (0.620) | 3 (0.080) | 3/242 | NT | 10.3% | coding (1087/2406 nt) | PP_3575 | ferric siderophore receptor |
? | NC_002947 | = 4056629 | 28 (0.710) | coding (1033/2406 nt) | PP_3575 | ferric siderophore receptor |
ATGGTTGCTCTTGCGCGCGCCAACCGCACCATAGGCCAGCAGCGATTCGCTGATATCGTACTCGGCGTTCAGCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4056420‑4056575 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accttggcCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTGCCCAATGCCAATGACGTACGCCACAACTACGCCCAGGCCTGGAGCAAGGCGCGTACCAACGACACCTTCGGTGCGCT < NC_002947/4056629‑4056490 ATGGTTGCTCTTGCGCGCGCCAACCGCACCATAGGCCAGCAGCGATTCGCTGATATCGTACTCGGCGTTCAGCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCA > 6:261760/1‑149 TGGTTGCTCTTGCGCGCGCCAACCGCACCATAGGCCAGCAGCGATTCGCTGATATCGTACTCGGCGTTCAGCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCAC > 1:165932/1‑149 GCCAACCGCACCATAGGCCAGCAGCGATTCGCTGATATCGTACTCGGCGTTCAGCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTGGC > 7:187120/1‑138 GCCAACCGCACCATAGGCCAGCAGCGATTCGCTGATATCGTACTCGGCGTTCAGCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTGGC < 8:187120/138‑1 TCGGCGTTCAGCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTG < 1:47204/93‑1 TCGGCGTTCAGCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTG > 2:47204/1‑93 GCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTGC < 2:165932/149‑1 TCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTG < 7:49858/115‑1 TCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTG > 8:49858/1‑115 atACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTGCCCAATGCCAATGACGTACGCCACAACTACGCCCAGGCCTGGAGCAAGGCGCGTACCAACGACACCTTCGGTGCGC < 3:11845/147‑1 ACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTGCCCAATGCCAATGACGTACGCCACAACTACGCCCAGGCCTGGAGCAAGGCGCGTACCAACGACACCTTCGGTGCGCT > 2:62349/1‑148 ACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTGCCCAATGCCAATGACGTACGCCACAACTACGCCCAGGCCTGGAGCAAGGCGCGTACCAACGACACCTTCGGTGCGCT > 7:236443/1‑148 CCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTGCCCAATGCCAATGACGTACGCCACAACTACGCCCAGGCCTGGAGCAAGGCGCGTACCAACGACACCTTCG > 5:249839/1‑134 CCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTGCCCAATGCCAATGACGTACGCCACAACTACGCCCAGGCCTGGAGCAAGGCGCGTACCAACGACACCTTCG < 6:249839/134‑1 CCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCA < 5:231478/59‑1 CCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCA > 6:231478/1‑59 ATGGTTGCTCTTGCGCGCGCCAACCGCACCATAGGCCAGCAGCGATTCGCTGATATCGTACTCGGCGTTCAGCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4056420‑4056575 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accttggcCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTGCCCAATGCCAATGACGTACGCCACAACTACGCCCAGGCCTGGAGCAAGGCGCGTACCAACGACACCTTCGGTGCGCT < NC_002947/4056629‑4056490 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |