New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 405657526 (0.620)3 (0.080) 3/242 NT 10.3% coding (1087/2406 nt) PP_3575 ferric siderophore receptor
?NC_002947 = 4056629 28 (0.710)coding (1033/2406 nt) PP_3575 ferric siderophore receptor

ATGGTTGCTCTTGCGCGCGCCAACCGCACCATAGGCCAGCAGCGATTCGCTGATATCGTACTCGGCGTTCAGCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4056420‑4056575
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accttggcCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTGCCCAATGCCAATGACGTACGCCACAACTACGCCCAGGCCTGGAGCAAGGCGCGTACCAACGACACCTTCGGTGCGCT  <  NC_002947/4056629‑4056490
                                                                                                                                                                                                                                                                                                        
ATGGTTGCTCTTGCGCGCGCCAACCGCACCATAGGCCAGCAGCGATTCGCTGATATCGTACTCGGCGTTCAGCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCA                                                                                                                                                     >  6:261760/1‑149
 TGGTTGCTCTTGCGCGCGCCAACCGCACCATAGGCCAGCAGCGATTCGCTGATATCGTACTCGGCGTTCAGCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCAC                                                                                                                                                    >  1:165932/1‑149
                  GCCAACCGCACCATAGGCCAGCAGCGATTCGCTGATATCGTACTCGGCGTTCAGCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTGGC                                                                                                                                              >  7:187120/1‑138
                  GCCAACCGCACCATAGGCCAGCAGCGATTCGCTGATATCGTACTCGGCGTTCAGCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTGGC                                                                                                                                              <  8:187120/138‑1
                                                             TCGGCGTTCAGCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTG                                                                                                                                                <  1:47204/93‑1
                                                             TCGGCGTTCAGCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTG                                                                                                                                                >  2:47204/1‑93
                                                                       GCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTGC                                                                              <  2:165932/149‑1
                                                                                                        TCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTG                                                                               <  7:49858/115‑1
                                                                                                        TCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTG                                                                               >  8:49858/1‑115
                                                                                                                                                  atACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTGCCCAATGCCAATGACGTACGCCACAACTACGCCCAGGCCTGGAGCAAGGCGCGTACCAACGACACCTTCGGTGCGC   <  3:11845/147‑1
                                                                                                                                                    ACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTGCCCAATGCCAATGACGTACGCCACAACTACGCCCAGGCCTGGAGCAAGGCGCGTACCAACGACACCTTCGGTGCGCT  >  2:62349/1‑148
                                                                                                                                                    ACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTGCCCAATGCCAATGACGTACGCCACAACTACGCCCAGGCCTGGAGCAAGGCGCGTACCAACGACACCTTCGGTGCGCT  >  7:236443/1‑148
                                                                                                                                                           CCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTGCCCAATGCCAATGACGTACGCCACAACTACGCCCAGGCCTGGAGCAAGGCGCGTACCAACGACACCTTCG         >  5:249839/1‑134
                                                                                                                                                           CCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTGCCCAATGCCAATGACGTACGCCACAACTACGCCCAGGCCTGGAGCAAGGCGCGTACCAACGACACCTTCG         <  6:249839/134‑1
                                                                                                                                                           CCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCA                                                                                    <  5:231478/59‑1
                                                                                                                                                           CCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCA                                                                                    >  6:231478/1‑59
                                                                                                                                                                                                                                                                                                        
ATGGTTGCTCTTGCGCGCGCCAACCGCACCATAGGCCAGCAGCGATTCGCTGATATCGTACTCGGCGTTCAGCGCACCGAAGGTGTCGTTGGTACGCGCCTTGCTCCAGGCCTGGGCGTAGTTGTGGCGTACGTCATTGGCATTGGGCACCTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4056420‑4056575
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accttggcCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTGCCCAATGCCAATGACGTACGCCACAACTACGCCCAGGCCTGGAGCAAGGCGCGTACCAACGACACCTTCGGTGCGCT  <  NC_002947/4056629‑4056490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.