New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4127932 =	45 (1.070)	3 (0.070)	3/248	NT	6.0%	coding (301/651 nt)	htrG	signal transduction protein
	?	NC_002947	4127966 =	51 (1.260)					coding (335/651 nt)	htrG	signal transduction protein

TGCCTCCAACTCATCAATCAGCTGCTTGCGCGAATCAAGCGTTTCCTGCATGCCCTGTACGCGGTTCTTCCAGCTGTCGTCGATGGTCTTCAACTGCCCGGTCAGTTCGGTGACCTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4128081‑4127932 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccAGGTCACCGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGAT  >  NC_002947/4127966‑4128111                                                                                                                                                                                                                                                                                                          TGCCTCCAACTCATCAATCAGCTGCTTGCGCGAATCAAGCGTTTCCTGCATGCCCTGTACGCGGTTCTTCCAGCTGTCGTCGATGGTCTTCAACTGCCCGGTCAGTTCGGTGACCTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCC                                                                                                                                                     >  8:163859/1‑149                                                                                                                 ACCTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCCCAGGTCACCGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGG                                     >  2:127298/1‑149                                                                                                                   CTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCCCAGGTCACCGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGA                                    <  5:192844/148‑1                                                                                                                   CTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCCCAGGTCACCGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTG                                      >  6:192844/1‑146                                                                                                                                                    CCCAGGTCACCGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGAT  <  2:147283/149‑1                                                                                                                                                    CCCAGGTCACCGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTC     >  1:169623/1‑146                                                                                                                                                    CCCAGGTCACCGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTC     <  2:169623/146‑1                                                                                                                                                                                                                                                                                                          TGCCTCCAACTCATCAATCAGCTGCTTGCGCGAATCAAGCGTTTCCTGCATGCCCTGTACGCGGTTCTTCCAGCTGTCGTCGATGGTCTTCAACTGCCCGGTCAGTTCGGTGACCTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4128081‑4127932 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccAGGTCACCGAACTGACCGGGCAGTTGAAGACCATCGACGACAGCTGGAAGAACCGCGTACAGGGCATGCAGGAAACGCTTGATTCGCGCAAGCAGCTGATTGATGAGTTGGAGGCACGCAACAAGGCACTGAACGAGCAGCTCGAT  >  NC_002947/4127966‑4128111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.