New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4238005 =	47 (1.110)	4 (0.100)	4/244	NT	8.3%	coding (245/1122 nt)	catB	muconate cycloisomerase 1
	?	NC_002947	4238048 =	44 (1.100)					coding (202/1122 nt)	catB	muconate cycloisomerase 1

ATCAAGGCCAACATCGACGCGTACCTCGCCCCAGCGTTGATTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4238051‑4238005 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggcctTGATCCCTTCGGGGCTTTCGTAGCCATACGCCAGGCCACCGATGGTGGTGGCTTCACCGATGCCTTCCACGCCATCGCTGCAGCGCAGTCGCAATACCACCAGGG  >  NC_002947/4238048‑4238152                                                                                                                                                          ATCAAGGCCAACATCGACGCGTACCTCGCCCCAGCGTTGATTGGCCTTGATCCCTTCGGGGCTTTCGTAGCCATACGCCAGGCCACCGATGGTGGTGGCTTCACCGATGCCTTCCACGCCATCGATGCAGCGCAGTCGCAATACCAC       >  3:72427/1‑147   CAAGGCCAACATCGACGCGTACCTCGCCCCAGCGTTGATTGGCCTTGATCCCTTCGGGGCTTTCGTAGCCATACGCCAGGCCACCGATGGTGGTGGCTTCACCGATGCCTTCCACGCCATCGCTGCA                         <  5:87777/127‑1   CAAGGCCAACATCGACGCGTACCTCGCCCCAGCGTTGATTGGCCTTGATCCCTTCGGGGCTTTCGTAGCCATACGCCAGGCCACCGATGGTGGTGGCTTCACCGATGCCTTCCACGCCATCGCTGCA                         >  6:87777/1‑127    AAGGCCAACATCGACGCGTACCTCGCCCCAGCGTTGATTGGCCTTGATCCCTTAGGGGCTTTCGTAGCCATACGCCAGGCCACAGATGGTGTTGGCTTCACCGATGCCGTCCACGCCATCGCTGCAGCGCAGTCGCAATCACACCAGGG  >  6:62480/1‑149                                                                                                                                                          ATCAAGGCCAACATCGACGCGTACCTCGCCCCAGCGTTGATTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4238051‑4238005 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggcctTGATCCCTTCGGGGCTTTCGTAGCCATACGCCAGGCCACCGATGGTGGTGGCTTCACCGATGCCTTCCACGCCATCGCTGCAGCGCAGTCGCAATACCACCAGGG  >  NC_002947/4238048‑4238152

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.