New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4557241 =	49 (1.160)	3 (0.070)	3/250	NT	5.7%	coding (236/984 nt)	gntZ	6‑phosphogluconate dehydrogenase
	?	NC_002947	4557288 =	52 (1.270)					coding (189/984 nt)	gntZ	6‑phosphogluconate dehydrogenase

TATGGGTGATGCTGCCGGCTGGTGACGCCACCGAGCAGACCATCGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4557289‑4557241 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaTACCGCGCGCGGCGCTTTCAGCTTTTGTACCAGTGCACCGAGGTCATGCGCACCCTGGGCGCCTTCGCCCTCCAGGCCGGTGATGGCATCACGGTTGCGGTCGTGCACCACGGTGCGGTGACCGGCGCGCATCAGGCGCCTTG  >  NC_002947/4557288‑4557430                                                                                                                                                                                                  TATGGGTGATGCTGCCGGCTGGTGACGCCACCGAGCAGACCATCGCCCATACCGCGGGCGGCGCTTTCAGCTTTTGTACCAGTGCACCGAGGTCATGCGCACCCTGGGCGCCTTCGCCGTCCAGGCCGGTGATGGCATCACGGTTGCGG                                             >  1:26723/1‑149   TGGGTGATGCTGCCGGCTGGTGACGCCACCGAGCAGACCATCGCCCATACCGCGCGCGGCGCTTTCAGCTTTTGTACCAGTGCACCGAGGTCATGCGCACCCTGGGCGCCTTCGCCCTCCAGGCCGGTGATGGCATCACGGTTGCGGTC                                           >  7:54268/1‑149      GTGATGCTGCCGGCTGGTGACGCCACCGAGCAGACCATCGCCCATACCGCGCGCGGCGCTTTCAGCTTTTGTACCAGTGCACCGAGGTCATGCGCACCCTGGGCGCCTTCGCCCTCCAGGCCGGTGATGGCATCACGGTTGCGGTCGTG                                        <  8:54268/149‑1                                            ccCCCATCCCGCGCGCGGCGCGTTCAGCGTTTGTACCAGTGCACCGCGGTCAGGCGCACCCTGGGCGCCTTCGCCCTCCAGGCCGGTGAGGGCATCACGGTTGCGGTCGTGCACCACGGTGCGGTGACCGGCGCGCATCAGGCGCCTTG  <  1:153657/147‑1                                                                                                                                                                                                  TATGGGTGATGCTGCCGGCTGGTGACGCCACCGAGCAGACCATCGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4557289‑4557241 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaTACCGCGCGCGGCGCTTTCAGCTTTTGTACCAGTGCACCGAGGTCATGCGCACCCTGGGCGCCTTCGCCCTCCAGGCCGGTGATGGCATCACGGTTGCGGTCGTGCACCACGGTGCGGTGACCGGCGCGCATCAGGCGCCTTG  >  NC_002947/4557288‑4557430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.