| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4911617 = | 39 (0.920) | 4 (0.100) | 4/246 | NT | 9.4% | coding (95/1197 nt) | cycH | cytochrome c‑type biogenesis protein |
| ? | NC_002947 | 4911645 = | 40 (0.990) | coding (67/1197 nt) | cycH | cytochrome c‑type biogenesis protein | |||||
GTCTCGCCAAACTGCTGGAAAAAGAACAGACCCATGATTGAATTCTGGCTTAGCGCGGGCCTTCTGCTGCTCGCTGCCCTCAGCTTTTTGCTGCTCCCGATCCTGCGTGGCCGCCGTCGCCA‑GCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4911744‑4911617‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggaTCGGGAGCAGCAAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGCACGGCC > NC_002947/4911645‑4911788 GTCTCGCCAAACTGCTGGAAAAAGAACAGACCCATGATTGAATTCTGGCTTAGCGCGGGCCTTCTGCTGCTCGCTGCCCTCAGCTTTTTGCTGCTCCCGATCCTGC‑TGGCGACGGCGGCCACGCAGGATCGGGAGCAGCAAAAAGCTGA < 2:15237/149‑1 GATCCTGCGTGGCCGCCGTCGCCA‑GCAGGATCGGGAGCAGCAAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCC > 7:142502/1‑114 GATCCTGCGTGGCCGCCGTCGCCA‑GCAGGATCGGGAGCAGCAAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCC < 8:142502/114‑1 ATCCTGCGTGGCCGCCGTCGCCA‑GCAGGATCGGGAGCAGCAAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGA > 1:130008/1‑148 GCCA‑GCAGGATCGGGAGCAGCAAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC < 2:130008/148‑1 CAGGATCGGGAGCAGCAAAAAGCTGAGGGCAGCGAGCAGCATAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGCACGGCC < 1:88542/149‑1 GTCTCGCCAAACTGCTGGAAAAAGAACAGACCCATGATTGAATTCTGGCTTAGCGCGGGCCTTCTGCTGCTCGCTGCCCTCAGCTTTTTGCTGCTCCCGATCCTGCGTGGCCGCCGTCGCCA‑GCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4911744‑4911617‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggaTCGGGAGCAGCAAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGCACGGCC > NC_002947/4911645‑4911788 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |