| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5153589 = | 42 (0.990) | 7 (0.170) | 4/246 | NT | 14.7% | coding (624/876 nt) | PP_4537 | membrane protein |
| ? | NC_002947 | 5153628 = | 41 (1.020) | coding (585/876 nt) | PP_4537 | membrane protein | |||||
CCGTCACTTGGTCGCTCGCCACCCCAGCGACCTGCCACACTACGCCCGCTTCGGTTACTTCTACCTCGGTGCGTTGCTGGTGGTGCTGCCGGCCTTCCTGCTGTTCGGCAATACCCAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5153742‑5153589‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctgGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGGCGAGCGACCAAGTGACGGTACAGCACCTGGCCGGCAGCGTAGGTGAAG > NC_002947/5153628‑5153772 CCGTCACTTGGTCGCTCGCCACCCCAGCGACCTGCCACACTACGCCCGCTTCGGTTACTTCTACCTCGGTGCGTTGCTGGTGGTGCTGCCGGCCTTCCTGCTGTTCGGCAATACCCAGCACTTGCCGAGCACTGACGTGCAATGGCTGG < 3:87266/149‑1CCGTCACTTGGTCGCTCGCCACCCCAGCGACCTGCCACACTACGCCCGCTTCGGTTACTTCTACCTCGGTGCGTTGCTGGTGGTGCTGCCGGCCTTCCTGCTGTTCGGCAATACCCAGCACTTGCCGAGCACTGACGTGCAATGGCTGG > 4:148901/1‑149 GTCACTTGGTCGCTCGCCACCCCAGCGACCTGCCACACTACGCCCGCTTCGGTTACTTCTACCTCGGTGCGTTGCTGGTGGTGCTGCCGGCCTTCCTGCTGTTCGGCAATACCCAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTG > 6:39286/1‑149 ACTTGGTCGCTCGCCACCCCAGCGACCTGCCACACTACGCCCGCTTCGGTTACTTCTACCTCGGTGCGTTGCTGGTGGTGCTGCCGGCCTTCCTGCTGTTCGGCAATACCCAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCT < 6:168221/148‑1 CCAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGGTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCAGCGCCAG > 8:40975/1‑79 CCAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTTGGTTTTGCCGAACAGCCGGAAGGCCGGCAGCACCACCAG < 7:40975/79‑1 CCAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGGCGAGCGACCAAG > 1:88953/1‑149 CCAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGC > 5:79220/1‑122 CCAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGC < 6:79220/122‑1 CCAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGAGGGCGGAGTGTGGCAGGTCGCTGGGGTGGAGAGCGACCAAG > 8:150153/1‑149 CAATGGCTGGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGGCGAGCGACCAAGTGACGGTACAGCACCTGGCCGGCA < 2:88953/148‑1 CTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGGCGAGCGACCAAGTGACGGTACAGCACCTGGCCGGCAGCGTAGGTGAAG < 4:87266/148‑1 CCGTCACTTGGTCGCTCGCCACCCCAGCGACCTGCCACACTACGCCCGCTTCGGTTACTTCTACCTCGGTGCGTTGCTGGTGGTGCTGCCGGCCTTCCTGCTGTTCGGCAATACCCAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5153742‑5153589‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctgGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGGCGAGCGACCAAGTGACGGTACAGCACCTGGCCGGCAGCGTAGGTGAAG > NC_002947/5153628‑5153772 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |