| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5153589 = | 42 (0.990) | 7 (0.170) | 4/246 | NT | 14.7% | coding (624/876 nt) | PP_4537 | membrane protein |
| ? | NC_002947 | 5153628 = | 41 (1.020) | coding (585/876 nt) | PP_4537 | membrane protein | |||||
GCTGGTTCCAGATCAACAGGTTCAGCAGCAGCCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGGCGAGCGACC > NC_002947/5153444‑5153733 | cttcacctacgctgccggccaggtgctgtaccgtcacttggtcgctcgccaccccagcgacctgccacactacgcccgcttcggttacttctacctcggtgcgttgctggtggtgctgccggccttcctgctgttcggcaataccCAg < 4:87266‑M1/3‑1 (MQ=255) tGGTTCCAGATCAACAGGTTCAGCAGCAGCCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCAc > 3:12411/1‑149 (MQ=255) gTTCCAGATCAACAGGTTCAGCAGCAGCCCCCCCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGccc > 4:150925/1‑145 (MQ=255) ccAGATCAACAGGTTCAGCAGCAGCCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGc > 8:19821/1‑148 (MQ=255) tgccggccaggtgctgtaccgtcacttggtcgctcgccaccccagcgacctgccacactacgcccgcttcggttacttctacctcggtgcgttgctggtggtgctgccggccttcctgctgttcggcaataccCAGCACCAGCCATTg < 2:88953‑M1/15‑1 (MQ=255) aCAGGTTCAGCAGCAGCCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACg > 4:88185/1‑149 (MQ=255) cAGGTTCAGGAGCAGCCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGt < 2:76187/149‑1 (MQ=255) ttCAGCAGCAGCCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGTCACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGt > 5:231873/1‑149 (MQ=255) gcagcagcCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTc > 6:255828/1‑149 (MQ=255) gcagcagcCACACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCTGCCATTGCACGTCAGTGCTc < 4:12411/149‑1 (MQ=255) agcagcCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCgg > 3:2467/1‑149 (MQ=255) agcCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGc > 6:233264/1‑147 (MQ=255) ccccACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGt > 6:31219/1‑149 (MQ=255) cttggtcgctctccaccccagcgacctgccacactccgccctcttcggttacttctacctcggtgcgttgctggtggtgctgccggccttcctgctgttcggcaataccCAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTgg > 8:150153‑M1/110‑149 (MQ=255) cttggtcgctcgccaccccagcgacctgccacactacgcccgcttcggttacttctacctcggtgcgttgctggtggtgctgccggccttcctgctgttcggcaataccCAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTgg > 1:88953‑M1/110‑149 (MQ=255) ccGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACCCAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTgg < 4:42730/149‑1 (MQ=255) ccGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTgg < 5:255828/149‑1 (MQ=255) aTGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGATACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGc < 5:161993/149‑1 (MQ=255) aGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGaa < 4:2467/149‑1 (MQ=255) aGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCAGaa > 7:121593/1‑149 (MQ=255) atcaCCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGaa < 6:231873/149‑1 (MQ=255) gccacactacgcccgcttcggttacttctacctcggtgcgttgctggtggtgctgccggccttcctgctgttcggcaataccCAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTgg < 6:79220‑M1/40‑1 (MQ=255) gccacactacgcccgcttcggttacttctacctcggtgcgttgctggtggtgctgccggccttcctgctgttcggcaataccCAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTgg > 5:79220‑M1/83‑122 (MQ=255) cGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCaccacc < 5:31219/149‑1 (MQ=255) gCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCAccacca < 7:19821/149‑1 (MQ=255) gCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCAccacca < 1:158982/149‑1 (MQ=255) cAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAg > 7:128785/1‑148 (MQ=255) aTGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTc < 1:270463/79‑1 (MQ=255) aTGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTc > 2:270463/1‑79 (MQ=255) gCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAgg > 1:92077/1‑147 (MQ=255) gCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAgg < 2:92077/147‑1 (MQ=255) ccTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGGCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGaa < 5:233264/149‑1 (MQ=255) tGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTa < 8:128785/148‑1 (MQ=255) ttCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAAc < 8:121593/148‑1 (MQ=255) ttCCACCAGTACAGCACCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAAc < 6:173799/148‑1 (MQ=255) accaGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAg > 3:148901/1‑149 (MQ=255) accaGTACAGCCCCAGCGCCGACGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAg > 2:74895/1‑149 (MQ=255) caGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCg > 5:241395/1‑149 (MQ=255) ctggtggtgctgccggccttccggctgttcggcaaaaccAAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTgg < 7:40975‑M1/40‑1 (MQ=255) ctggcgctgctgccggccttcctgctgttcggcaataccCACCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTgg > 8:40975‑M1/40‑79 (MQ=255) ccAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAgtgt < 6:4053/149‑1 (MQ=255) ccAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAgtgt > 5:4053/1‑149 (MQ=255) gcCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGAAGAAGTAACCGAAGCGGGCGTAGTGTGGCAg > 6:172530/1‑149 (MQ=255) ggACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCa > 7:122290/1‑100 (MQ=255) ggACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCa < 8:122290/100‑1 (MQ=255) acaGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTgggg > 2:98345/1‑149 (MQ=255) acaGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTgggg > 5:39286/1‑149 (MQ=255) aGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGgcag > 5:178596/1‑83 (MQ=255) aGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGgcag < 6:178596/83‑1 (MQ=255) aGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAACTGCTGGGTATTGACGAACAGCAGGAACGCCGGCAGcac > 5:156824/1‑86 (MQ=255) aGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGgcgagc < 6:241395/149‑1 (MQ=255) caacaGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGGCGAGCGAcc > 4:263743/1‑148 (MQ=255) | GCTGGTTCCAGATCAACAGGTTCAGCAGCAGCCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGGCGAGCGACC > NC_002947/5153444‑5153733 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |