New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5245883	48 (1.140)	3 (0.070)	3/246	NT	6.1%	coding (2778/3303 nt)	PP_4623	hypothetical protein
	?	NC_002947	= 5245916	47 (1.170)					coding (2745/3303 nt)	PP_4623	hypothetical protein

CGGCACGGTGAGGATGCCGGCCAGTACGATCCCCCACTCCACCACCACGGACGAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5245733‑5245883 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgAGGCAGGGGCGTGCGGCCGCCGATAGGGGAGACCGGGCGTATCGGGGATCCTGTCCAGGACCTGGAGAAACGTATCAGGCGGATGATCAACGAAGCCGCTGAAGACAGCGCCGACGCTGCCGAGCGTATTTCGTCCGTGGTGGT  <  NC_002947/5245916‑5245773                                                                                                                                                                                                                                                                                                         CGGCACGGTGAGGATGCCGGCCAGTACGATCCCCCACTCCACCACCACGGACGAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCC                                                                                                                                                    <  2:113004/149‑1       GGTGAGGATGCCGGCCAGTACGATCCCCCACTCCACCACCACGGACGAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCG                                                                                                                                                  >  1:71682/1‑145       GGTGAGGATGCCGGCCAGTACGATCCCCCACTCCACCACCACGGACGAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCG                                                                                                                                                  <  2:71682/145‑1                                             CCACGGACGAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGAGGCAGGGGCGTGCGGCCGCCGATAGGGGAGACCGGGCGTAT                                                                                                        <  2:140386/149‑1                                             CCACGGACGAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGAGGCAGGGGCGTGCGGCCGCCGATAGGGGAGACCGGGCGTAT                                                                                                        >  5:268645/1‑149                                               ACGGACGAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGAGGCAGGGGCGTGCGGCCGCCGATAGGGGAGACCGGGCGTATCG                                                                                                      <  6:268645/149‑1                                                                                                                                                   GCCCGAGGCAGGGGCGTGCGGCCGCCGATAGGGGAGACCGGGCGTATCGGGGATCCTGTCCAGGACCTGGAGAAACGTATCAGGCGGATGATCAACGAAGCCGCTGAAGACAGCGCCGACGCTGCCGAGCGTATTTCGTCCGTGGTGGT  >  3:26600/1‑149                                                                                                                                                       GAGGCAGGGGCGTGCGGCCGCCGATAGGGGAGACCGGGCGTATCGGGGATCCTGTCCAGGACCTGGAGAAACGTATCAGGCGGATGATCAACGAAGCCGCTGAAGACAGCGCCGACGCTGCCGAGCGTATTTCGTCCGTGGTGGT  >  7:98708/1‑145                                                                                                                                                       GAGGCAGGGGCGTGCGGCCGCCGATAGGGGAGACCGGGCGTATCGGGGATCCTGTCCAGGACCTGGAGAAACGTATCAGGCGGATGATCAACGAAGCCGCTGAAGACAGCGCCGACGCTGCCGAGCGTATTTCGTCCGTGGTGGT  <  8:98708/145‑1                                                                                                                                                                                                                                                                                                         CGGCACGGTGAGGATGCCGGCCAGTACGATCCCCCACTCCACCACCACGGACGAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5245733‑5245883 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgAGGCAGGGGCGTGCGGCCGCCGATAGGGGAGACCGGGCGTATCGGGGATCCTGTCCAGGACCTGGAGAAACGTATCAGGCGGATGATCAACGAAGCCGCTGAAGACAGCGCCGACGCTGCCGAGCGTATTTCGTCCGTGGTGGT  <  NC_002947/5245916‑5245773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.