| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5249547 = | 53 (1.260) | 6 (0.150) | 6/248 | NT | 10.4% | coding (275/906 nt) | PP_4624 | alpha/beta family hydrolase |
| ? | NC_002947 | 5249578 = | 52 (1.280) | coding (244/906 nt) | PP_4624 | alpha/beta family hydrolase | |||||
GCCCTCTGAGCCAACGTTTCCGGGTGATCGCTTGCGACATGCTCGGCTTTGGTGATTCGGACAAGCCCGTCGATCACACTTACAGCCTGATGGAGCAGGCAGACCTGCAGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5249661‑5249547‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGCCAGTCCCAACTGGCGGTGG > NC_002947/5249578‑5249694 GCCCTCTGAGCCAACGTTTCCGGGTGATCGCTTGCGACATGCTCGGCTTTGGTGATTCGGACAAGCCCGTCGATCACACTTACAGCCTGATGGAGCAGGCAGACCTGCAGC < 5:8707/111‑1GCCCTCTGAGCCAACGTTTCCGGGTGATCGCTTGCGACATGCTCGGCTTTGGTGATTCGGACAAGCCCGTCGATCACACTTACAGCCTGATGGAGCAGGCAGACCTGCAGC > 6:8707/1‑111 TTACAGCCTGATGGAGCAGGCAGACCTGCAGCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGC < 3:260314/134‑1 TTACAGCCTGATGGAGCAGGCAGACCTGCAGCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGC > 4:260314/1‑134 CAGCCTGATGGAGCAGGCAGACCTGCAGCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGCCAGTC < 7:82171/136‑1 CAGCCTGATGGAGCAGGCAGACCTGCAGCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGCCAGTC > 8:82171/1‑136 CCTGATGGAGCAGGCAGACCTGCAGCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGCCAGTCCCAACTGGCGGTGG > 1:163061/1‑147 CCTGATGGAGCAGGCAGACCTGCAGCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGCCAGTCCCAACTGGCGGTGG < 2:163061/147‑1 GCCCTCTGAGCCAACGTTTCCGGGTGATCGCTTGCGACATGCTCGGCTTTGGTGATTCGGACAAGCCCGTCGATCACACTTACAGCCTGATGGAGCAGGCAGACCTGCAGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5249661‑5249547‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGCCAGTCCCAACTGGCGGTGG > NC_002947/5249578‑5249694 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |