New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5249547 =	53 (1.260)	6 (0.150)	6/248	NT	10.4%	coding (275/906 nt)	PP_4624	alpha/beta family hydrolase
	?	NC_002947	5249578 =	52 (1.280)					coding (244/906 nt)	PP_4624	alpha/beta family hydrolase

CCCGCTGTTGAGAAACACGCAACTGGCGATGTCGGCACGCTGCTCATGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGCCAGTCCCAACTGGCGGTG  >  NC_002947/5249408‑5249693                                                                                                                                            |                                                                                                                                                   cccGCTGTTGAGAAACACGCAACTGGCGATGTCGGCACGCTGCTCATGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTTCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCctgctg                                                                                                                                             >  5:191965/1‑147 (MQ=255)         tGAGAATCACGCAACTGGCGATGTCGGCAGGCTGCTCATGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTctgc                                                                                                                                    <  2:259153/148‑1 (MQ=255)          gagaAACACGCAACTGGCGATGTCGGCACGCTGCTCATGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTctgcct                                                                                                                                  >  5:142178/1‑149 (MQ=255)          gagaAACACGCAACTGGCGATGTCGGCACGCTGCTCATGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTctgcc                                                                                                                                   <  5:251737/148‑1 (MQ=255)            gaAACACGCAACTGGCGATGTCGGCACGCTGCTCATGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTctgcctgc                                                                                                                                >  7:248209/1‑149 (MQ=255)            gaAACACGCAACTGGCGATGTCGGCACGCTGCTCATGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTctgcctgc                                                                                                                                <  4:44724/149‑1 (MQ=255)               acacGCAACTGGCGATGTCGGCACGCTGCTCATGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTcc                                                                                                                             <  8:248209/149‑1 (MQ=255)                 acGCAACTGGCGATGTCGGCACGCTGCTCATGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCAt                                                                                                                           >  4:36518/1‑149 (MQ=255)                       ccaccgccagttgggactggcactacctgtggggccctctgagccaacgtttccgggtgatcgcttgcgacatgctcggctttggtgattcggacaagcccgtcgatcacacttacaGCCTGCTGCAGGTCTGCCTGCTCCATCAgg                                                                                                                       >  1:163061‑M1/118‑147 (MQ=255)                       ccaccgccagttgggactggcactacctgtggggccctctgagccaacgtttccgggtgatcgcttgcgacatgctcggctttggtgattcggacaagcccgtcgatcacacttacaGCCTGCTGCAGGTCTGCCTGCTCCATCAgg                                                                                                                       <  2:163061‑M1/30‑1 (MQ=255)                           cGATGTCGGCACGCTGCTCATGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTaa                                                                                                                 <  1:64386/149‑1 (MQ=255)                            gATGTCGGCACGCTGCTCATGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAg                                                                                                                >  2:252713/1‑149 (MQ=255)                                 cGGCACGCTGCTCATGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGa                                                                                                           <  8:203251/149‑1 (MQ=255)                                     gactggcactacctgtggggccctctgagccaacgtttccgggtgatcgcttgcgacatgctcggctttggtgattcggacaagcccgtcgatcacacttacaGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTg                                                                                                                    >  8:82171‑M1/104‑136 (MQ=255)                                     gactggcactacctgtggggccctctgagccaacgtttccgggtgatcgcttgcgacatgctcggctttggtgattcggacaagcccgtcgatcacacttacaGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTg                                                                                                                    <  7:82171‑M1/33‑1 (MQ=255)                                       gctgctCATGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACg                                                                                                     >  6:52311/1‑149 (MQ=255)                                          gcactacctgtggggccctctgagccaacgtttccgggtgatcgcttgcgacatgctcggctttggtgattcggacaagcccgtcgatcacacttacaGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTaa                                                                                                                 <  3:260314‑M1/36‑1 (MQ=255)                                          gcactacctgtggggccctctgagccaacgtttccgggtgatcgcttgcgacatgctcggctttggtgattcggacaagcccgtcgatcacacttacaGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTaa                                                                                                                 >  4:260314‑M1/99‑134 (MQ=255)                                           ctCATGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGc                                                                                                  <  5:121399/148‑1 (MQ=255)                                           ctCATGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCt                                                                                                 >  1:264777/1‑149 (MQ=255)                                              aTGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCt                                                                                                                               <  5:156257/116‑1 (MQ=255)                                              aTGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCt                                                                                                                               >  6:156257/1‑116 (MQ=255)                                                      gcgcCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGc                                                                                                  >  4:86677/1‑137 (MQ=255)                                                      gcgcCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGc                                                                                                  <  3:86677/137‑1 (MQ=255)                                                         ccAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCa                                                                                   <  3:36518/149‑1 (MQ=255)                                                               gTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCg                                                                             <  6:142178/149‑1 (MQ=255)                                                                ttCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGAGCGACGGGCTTGTCCGAATCACCAAAGCCGa                                                                            <  5:52311/149‑1 (MQ=255)                                                                  ccTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTg                                                                                                                    >  4:252174/1‑107 (MQ=255)                                                                  ccTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTg                                                                                                                    <  3:252174/107‑1 (MQ=255)                                                                      aGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGt                                                                      >  2:49343/1‑149 (MQ=255)                                                                         cACGCTGCCGCCGTAGTCGTGGGCCAGCAGCTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCg                                                                    >  1:22440/1‑148 (MQ=255)                                                                           cGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAATCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCaa                                                                 <  3:140888/149‑1 (MQ=255)                                                                                ccgccgTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGAt                                                            >  1:137911/1‑149 (MQ=255)                                                                                  gccgTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCa                                                          >  7:202647/1‑149 (MQ=255)                                                                                         tCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAg                                                                           <  5:22699/125‑1 (MQ=255)                                                                                         tCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAAAGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAg                                                                           >  6:22699/1‑125 (MQ=255)                                                                                           gTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAg                                                                >  1:123815/1‑134 (MQ=255)                                                                                           gTGGGCCAGCAGGTGCACCGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAg                                                                <  2:123815/134‑1 (MQ=255)                                                                                              ggCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGtt                                              <  4:101658/149‑1 (MQ=255)                                                                                              ggCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGt                                               <  1:252713/148‑1 (MQ=255)                                                                                                ccAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTgg                                            <  8:202647/149‑1 (MQ=255)                                                                                                  agcagGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCt                                          <  6:191965/149‑1 (MQ=255)                                                                                                   gcagGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCt                                          >  4:262654/1‑148 (MQ=255)                                                                                                         gCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAg                                                                <  8:141986/120‑1 (MQ=255)                                                                                                         gCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCGTGTCCGAATCACCAAAGCCGAGCATGTCGCAAg                                                                >  7:141986/1‑120 (MQ=255)                                                                                                          cACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGc                                  >  2:242237/1‑149 (MQ=255)                                                                                                              ggCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCAcc                                                                                    <  8:36230/95‑1 (MQ=255)                                                                                                              ggCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCAcc                                                                                    >  7:36230/1‑95 (MQ=255)                                                                                                               gCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCcac                             <  1:49343/149‑1 (MQ=255)                                                                                                                         cTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGc                    >  5:216649/1‑148 (MQ=255)                                                                                                                          tGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGc                    >  8:188323/1‑147 (MQ=255)                                                                                                                           gCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCagag                                     <  8:197973/129‑1 (MQ=255)                                                                                                                           gCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCagag                                     >  7:197973/1‑129 (MQ=255)                                                                                                                           gCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGCCAg                 >  1:246965/1‑149 (MQ=255)                                                                                                                            cAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGCCAGt                <  2:22440/149‑1 (MQ=255)                                                                                                                            cAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGCCAGt                <  2:246965/149‑1 (MQ=255)                                                                                                                             aGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGTATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGc                                  <  3:66651/130‑1 (MQ=255)                                                                                                                             aGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGTATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGc                                  >  4:66651/1‑130 (MQ=255)                                                                                                                                     aaGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGCCAGTCCCAACTgg       <  7:188323/149‑1 (MQ=255)                                                                                                                                       gCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGCCAGTCCCAACTGGCg     <  7:42820/149‑1 (MQ=255)                                                                                                                                          aTGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGCCAGTCCCAACTGGCGGTg  <  6:216649/149‑1 (MQ=255)                                                                                                                                            |                                                                                                                                                   CCCGCTGTTGAGAAACACGCAACTGGCGATGTCGGCACGCTGCTCATGGTGTCGCGCCAGCAGTTCCTGAGCCACGCTGCCGCCGTAGTCGTGGGCCAGCAGGTGCACGGGCTGCGCGACCTGCAGATGGACAAGCAATGCCTGCTGCAGGTCTGCCTGCTCCATCAGGCTGTAAGTGTGATCGACGGGCTTGTCCGAATCACCAAAGCCGAGCATGTCGCAAGCGATCACCCGGAAACGTTGGCTCAGAGGGCCCCACAGGTAGTGCCAGTCCCAACTGGCGGTG  >  NC_002947/5249408‑5249693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.