New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5389220 = | 48 (1.140) | 3 (0.070) | 3/248 | NT | 5.9% | coding (2730/2811 nt) | dld2 | D‑lactate dehydrogenase |
? | NC_002947 | 5389259 = | 50 (1.230) | coding (2769/2811 nt) | dld2 | D‑lactate dehydrogenase |
CAGGACCGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGCGCTCCCCACCTATATCAACGCGTTAGAGGCTGCGTGGCCGGGTGACGCGGTCTACCAGGTAGACCAGGCCGTGGTAGTCGATGCCGCTGTGGCTCGACAGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5389364‑5389220 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGC > NC_002947/5389259‑5389405 CAGGACCGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGCGCTCCCCACCTATATCAACGCGTTAGAGGCTGCGTGGCCGGGTGACGCGGTCTACCAGGTAGACCAGGCCGTGGTAGTCGATGCCGCTGTGGCTCGACAGGC > 1:97895/1‑143 CAGGACCGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGCGCTCCCCACCTATATCAACGCGTTAGAGGCTGCGTGGCCGGGTGACGCGGTCTACCAGGTAGACCAGGCCGTGGTAGTCGATGCCGCTGTGGCTCGACAGGC < 2:97895/143‑1 ACCAGGCCGTGGTAGTCGATGCCGCTGTGGCTCGACAGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTA < 1:103006/115‑1 ACCAGGCCGTGGTAGTCGATGCCGCTGTGGCTCGACAGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTA > 2:103006/1‑115 CAGGCCGTGGTAGTCGATGCCGCTGTGGCTCGACAGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTG > 8:251851/1‑149 CTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGC < 7:251851/149‑1 CAGGACCGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGCGCTCCCCACCTATATCAACGCGTTAGAGGCTGCGTGGCCGGGTGACGCGGTCTACCAGGTAGACCAGGCCGTGGTAGTCGATGCCGCTGTGGCTCGACAGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5389364‑5389220 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGC > NC_002947/5389259‑5389405 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |