New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	401809 =	48 (1.140)	4 (0.110) +ACATAATGGGGTGTCAG	4/224	NT	8.9%	intergenic (+336/+93)	PP_0334/PP_0335	transposase/glutathione S‑transferase family protein
	?	NC_002947	5786515 =	46 (1.090)					intergenic (+58/‑73)	PP_5068/trxC	hypothetical protein/thioredoxin

TACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCGGCATAC  >  NC_002947/401662‑401956                                                                                                                                                     |                                                                                                                                                    tACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCgg                                                                                                                                                     <  8:3280/148‑1 (MQ=255) tACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGgt                                                                                                                                                    <  5:146813/149‑1 (MQ=255)         tGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCgg                                                                                                                                            >  1:270644/1‑149 (MQ=255)                   ttCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCAGCGAACACACATAATGGGGTGACAG‑GCACCGCCTTAGCCCGTGTTCGCTGGCACCCCCg                                                                                                                                   >  2:180984/1‑148 (MQ=37)                      cTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGCGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTc                                                                                                                                <  8:21197/148‑1 (MQ=255)                       tATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCTGAGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTcc                                                                                                                               >  1:89997/1‑149 (MQ=255)                          gTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCaa                                                                                                                            >  5:7530/1‑148 (MQ=255)                           ttCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTc                                                                                                                                <  8:116569/143‑1 (MQ=255)                           ttCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTc                                                                                                                                >  7:116569/1‑143 (MQ=255)                           ttCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCaaaa                                                                                                                          >  4:126129/1‑149 (MQ=255)                                aaaaGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCcca                                                                                                                     <  5:156406/149‑1 (MQ=255)                                        cTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGAt                                                                                                             <  1:75422/149‑1 (MQ=255)                                                  tgGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACt                                                                                                   >  6:79778/1‑149 (MQ=255)                                                   gggCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAacacag                                                                                                  >  1:66002/1‑147 (MQ=255)                                                     gCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACtgtg                                                                                                >  3:157243/1‑149 (MQ=255)                                                           ccATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGTCACGCCCCCTCCCAAAAGCACACCACAGATAGAGAACACTGTGGaaaa                                                                                           >  8:23991/1‑148 (MQ=255)                                                                cataGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCTGTTTTCGCGGGCACGCCCGCTTCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTg                                                                                      <  5:189530/148‑1 (MQ=255)                                                                 ataGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTg                                                                                      >  8:8208/1‑147 (MQ=255)                                                                 ataGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTa                                                                                    <  3:126129/149‑1 (MQ=255)                                                                    gACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGTACCCTGTGGAAAACCTTGGAg                                                                                   >  4:215572/1‑147 (MQ=255)                                                                    gACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAg                                                                                   >  3:41619/1‑147 (MQ=255)                                                                        gtgtGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCgg                                                                             <  5:79778/149‑1 (MQ=255)                                                                        gtgtGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCgg                                                                             <  8:74185/149‑1 (MQ=255)                                                                         tgtgGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCgg                                                                             <  8:74189/148‑1 (MQ=255)                                                                            gggCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCg                                                                                                         >  8:41344/1‑117 (MQ=255)                                                                            gggCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCg                                                                                                         <  7:41344/117‑1 (MQ=255)                                                                              gCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAT‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGACCACCACAGATAGCGAACAATGTGGAAAACCTTGTAGGAGCGGGTTTag                                                                       <  8:127883/149‑2 (MQ=255)                                                                               cGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTAcc                                                                      <  1:180984/149‑1 (MQ=255)                                                                                 aGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCcg                                                                    <  4:7825/149‑1 (MQ=255)                                                                                  gTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCcgc                                                                   >  5:109711/1‑149 (MQ=255)                                                                                        cttttgggagcgggagtgcccgcgaacaccggcgaagccggtgcctgacaccccattatgtGTGTTCGCGGGCAAGCCCGCTCCTAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAgg                                                              <  7:78268‑M1/88‑1 (MQ=255)                                                                                          ataGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGc                                                           <  3:243498/149‑1 (MQ=255)                                                                                           taGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGcc                                                          >  5:177851/1‑149 (MQ=255)                                                                                           taGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGcc                                                          <  6:177851/149‑1 (MQ=255)                                                                                             gggagcgggcgtgcccgcgaacaccggcgaagccggtgcctgacaccccattatgtGTGTTCGCGGGCAAGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCggg                                                                            <  8:109769‑M1/74‑1 (MQ=255)                                                                                             gggagcgggcgtgcccgcgaacaccggcgaagccggtgcctgacaccccattatgtGTGTTCGCGGGCAAGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCggg                                                                            >  7:109769‑M1/57‑130 (MQ=255)                                                                                                 cGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAgg                                                    <  1:100504/149‑1 (MQ=255)                                                                                                  gggCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCTGGTTTACCCGCGAAGGGGCCCTCAGGc                                                   <  2:89997/149‑1 (MQ=255)                                                                                                  gggCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGc                                                   <  6:109711/149‑1 (MQ=255)                                                                                                   ggCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGc                                                   >  8:30573/1‑148 (MQ=255)                                                                                                    gCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGACACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCa                                                 >  8:118/1‑149 (MQ=255)                                                                                                              gAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGt                                       <  2:270644/149‑1 (MQ=255)                                                                                                                    acaTAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGAc                                 <  6:7530/149‑1 (MQ=255)                                                                                                                     cggcgaagccggtgcctgacaccccattatgtGTGTTCGCGGGCAAGCCCGCTCCTAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGAc                                 >  8:78268‑M1/33‑149 (MQ=255)                                                                                                                      aTAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCa                               <  4:41619/149‑1 (MQ=255)                                                                                                                      aTAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCa                               >  5:231643/1‑149 (MQ=255)                                                                                                                          tGGGGTGTCAG‑GCAGCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGa                           <  7:23991/149‑1 (MQ=255)                                                                                                                           ggggTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGAt                          >  3:28970/1‑149 (MQ=255)                                                                                                                              gtgtCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGc                       >  5:198958/1‑149 (MQ=255)                                                                                                                               tgtCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCggg                                                                            >  7:252463/1‑95 (MQ=255)                                                                                                                               tgtCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCggg                                                                            <  8:252463/95‑1 (MQ=255)                                                                                                                                 cgcgaacACCGGCGAAGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGGAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGCCCATCGATGGCCg                     >  5:150318/7‑149 (MQ=255)                                                                                                                                   aG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCAATGGCGCTGTAGCGACCATCGATGGCCGCtt                  >  1:71296/1‑149 (MQ=255)                                                                                                                                            gCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCt          >  8:217567/1‑149 (MQ=255)                                                                                                                                                ctccGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCgg       <  7:17154/146‑1 (MQ=255)                                                                                                                                                cGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCg        <  7:30573/147‑1 (MQ=255)                                                                                                                                                 gCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCGGCa     <  4:157243/149‑1 (MQ=255)                                                                                                                                                     gtgtTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCGGCATAc  >  2:256916/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                    TACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAG‑GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCGGCATAC  >  NC_002947/401662‑401956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.