New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	436208 =	48 (1.140)	3 (0.070)	3/248	NT	5.8%	intergenic (+41/+192)	PP_0357/PP_0358	ACT domain‑containing protein/membrane protein
	?	NC_002947	436264 =	51 (1.260)					intergenic (+97/+136)	PP_0357/PP_0358	ACT domain‑containing protein/membrane protein

ATTGCTGGCGTTGCCGTTGACCTTGCCGCTGGAAGAACTGCAGCAGCGGCTGGAGAGCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTG  >  NC_002947/436062‑436354                                                                                                                                                   |                                                                                                                                                   aTTGCTGGCGTTGCCGTTGACCTTGCCGCTGGAAGAACTGCAGCAGCGGCTGGAGAGCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAg                                                                                                                                                  >  1:106091/1‑149 (MQ=255) aTTGCTGGCGTTGCCGTTGACCTTGCCGCTGGAAGAACTGCAGCAGCGGCTGGAGAGCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAg                                                                                                                                                  >  7:72945/1‑149 (MQ=255)  cgtagctgatcagaaaacgatcaaaactctgcaggtcatgtagcgcctggcctgcagagacatctccataggttatccacaccctcgtccccgcgctttgtgcacaagctgctgataattgggcattttttgagcaaaaccgtacAAgg                                                                                                                                                 >  8:23681‑M1/146‑149 (MQ=255)     cTGGCGTTGCCGTTGACCTTGCCGCTGGAAGAACTGCAGCAGCGGCTGGAGAGCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGcc                                                                                                                                               <  7:31561/148‑1 (MQ=255)       ggCGTTGCCGTTGACCTTGCCGCTGGAAGAACTGCAGCAGCGGCTGGAGAGCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCtg                                                                                                                                            >  8:76037/1‑149 (MQ=255)                gTTGACCTTGCCGCTGGAAGAACTGCAGCAGCGGCTGGAGAGCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAAcc                                                                                                                                   >  2:135938/1‑149 (MQ=255)                       ttGCCGCTGGAAGAACTGCAGCAGCGGCTGGAGACCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGgt                                                                                                                            >  7:111783/1‑149 (MQ=255)                         gCCGCTGGAAGAACTGCAGCAGCGGCTGGAGAGCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGgtg                                                                                                                           <  8:72945/148‑1 (MQ=255)                         gCCGCTGGAAGAACTGCAGCAGCGGCTGGAGAGCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGgt                                                                                                                            <  2:262785/147‑1 (MQ=255)                          ccGCTGGAAGAACTGCAGCAGCGGCTGGAGAGCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGgtgt                                                                                                                          <  7:76037/148‑1 (MQ=255)                           cGCTGGAAGAACTGCAGCAGCGGCTGGAGAGCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTAc                                                                                                                        <  8:25747/149‑1 (MQ=255)                              tGGAAGAACTGCAGCAGCGGCTGGAGAGCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACctc                                                                                                                     >  4:48319/1‑149 (MQ=255)                                  agaaCTGCAGCAGCGGCTGGAGAGCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCtctc                                                                                                                   >  1:30291/1‑147 (MQ=255)                                     aCTGCAACAGCGGCTTGAGAGCCTGGCTGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGcc                                                                                                              <  7:91423/149‑1 (MQ=255)                                       tGCAGCAGCGGCTGGAGAGCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGcc                                                                                                              >  5:254588/1‑147 (MQ=255)                                               cGGCTGGAGAGCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCAc                                                                                                    <  1:135938/149‑1 (MQ=255)                                                    cctgcagagacatctccataggttatccacaccctcgtccccgcgctttgtgcacaagctgctgataattgggcattttttgagcaaaaccgtacAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGcc                                                                                               <  7:66695‑M1/54‑1 (MQ=255)                                                     gagaGCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCt                                                                                              <  4:230906/149‑1 (MQ=255)                                                         agatacatctacataggttattcacaccctcgtccacgcgctttgtgcacaagctgcttataattgtgcttttttttagcaaaagtgtacAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTa                                                                                          >  8:66695‑M1/91‑149 (MQ=255)                                                          gagacatctccataggttatccacaccctcgtccccgcgctttgtgcacaagctgctgataattgggcattttttgagcaaaaccgtacAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTAc                                                                                         >  1:126006‑M1/90‑149 (MQ=255)                                                          ccTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTAc                                                                                         >  2:49610/1‑149 (MQ=255)                                                            tGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACgg                                                                                       >  3:1726/1‑149 (MQ=255)                                                              gCGGATGACTTGATTGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACgg                                                                                       <  4:5045/147‑1 (MQ=255)                                                                ggATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGGATCACGTGCCTTGTACGGtttt                                                                                   >  3:57989/1‑149 (MQ=255)                                                                 gATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTg                                                                                  >  5:214371/1‑149 (MQ=255)                                                                     aCTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTg                                                                                  <  3:155369/145‑1 (MQ=255)                                                                     aCTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTg                                                                                  >  4:155369/1‑145 (MQ=255)                                                                       ttGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCaa                                                                             >  8:133194/1‑148 (MQ=255)                                                                             gtggAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGc                                                                      >  3:80518/1‑149 (MQ=255)                                                                                   ttGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGtt                                                                                     >  2:22272/1‑128 (MQ=255)                                                                                   ttGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGtt                                                                                     <  1:22272/128‑1 (MQ=255)                                                                                   ttGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAAtt                                                                <  2:30291/149‑1 (MQ=255)                                                                                   ttGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAAt                                                                 >  5:200457/1‑148 (MQ=255)                                                                                          tGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTg                                                                                  <  3:243557/124‑1 (MQ=255)                                                                                          tGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTg                                                                                  >  4:243557/1‑124 (MQ=255)                                                                                                      aTTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATca                                                            >  6:138811/1‑134 (MQ=255)                                                                                                      aTTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATca                                                            <  5:138811/134‑1 (MQ=255)                                                                                                             aGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCgg                                      <  1:49610/149‑1 (MQ=255)                                                                                                              gCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCggg                                     >  1:133038/1‑149 (MQ=255)                                                                                                                    gtccATCTGCGGTTATCCCGATATCACGGGGAAGGCACTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCAGGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGTGACGAg                               <  8:111783/147‑1 (MQ=255)                                                                                                                         tCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTACTCAAAAAATGCCCAATTATc                                                             <  6:251272/114‑1 (MQ=255)                                                                                                                         tCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTACTCAAAAAATGCCCAATTATc                                                             >  5:251272/1‑114 (MQ=255)                                                                                                                          cTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGtgtg                         >  4:251675/1‑149 (MQ=255)                                                                                                                           tGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGcgcg                                       <  7:122912/134‑1 (MQ=255)                                                                                                                           tGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGcgcg                                       >  8:122912/1‑134 (MQ=255)                                                                                                                           tGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGa                                >  6:198432/1‑141 (MQ=255)                                                                                                                           tGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGa                                <  5:198432/141‑1 (MQ=255)                                                                                                                             cGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGgtgt                          <  6:214371/145‑1 (MQ=255)                                                                                                                                      cGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCAAGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATg              >  7:64392/1‑148 (MQ=255)                                                                                                                                           tCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGAt         <  8:64392/148‑1 (MQ=255)                                                                                                                                           tCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGAt         <  4:80518/148‑1 (MQ=255)                                                                                                                                             aCGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCt                                                                                <  6:37716/75‑1 (MQ=255)                                                                                                                                             aCGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCt                                                                                >  5:37716/1‑75 (MQ=255)                                                                                                                                             aCGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGtc      >  6:77238/1‑149 (MQ=255)                                                                                                                                                 ggAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTg  <  6:254588/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                   ATTGCTGGCGTTGCCGTTGACCTTGCCGCTGGAAGAACTGCAGCAGCGGCTGGAGAGCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTG  >  NC_002947/436062‑436354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.