New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	436208 =	48 (1.140)	3 (0.070)	3/248	NT	5.8%	intergenic (+41/+192)	PP_0357/PP_0358	ACT domain‑containing protein/membrane protein
	?	NC_002947	436264 =	51 (1.260)					intergenic (+97/+136)	PP_0357/PP_0358	ACT domain‑containing protein/membrane protein

GCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACG  >  NC_002947/436118‑436408                                                                                                                                                   |                                                                                                                                                 agatacatctacataggttattcacaccctcgtccacgcgctttgtgcacaagctgcttataattgtgcttttttttagcaaaagtgtacAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTa                                                                                                                                                >  8:66695‑M1/91‑149 (MQ=255)  gagacatctccataggttatccacaccctcgtccccgcgctttgtgcacaagctgctgataattgggcattttttgagcaaaaccgtacAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTAc                                                                                                                                               >  1:126006‑M1/90‑149 (MQ=255)  ccTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTAc                                                                                                                                               >  2:49610/1‑149 (MQ=255)    tGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACgg                                                                                                                                             >  3:1726/1‑149 (MQ=255)      gCGGATGACTTGATTGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACgg                                                                                                                                             <  4:5045/147‑1 (MQ=255)        ggATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGGATCACGTGCCTTGTACGGtttt                                                                                                                                         >  3:57989/1‑149 (MQ=255)         gATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTg                                                                                                                                        >  5:214371/1‑149 (MQ=255)             aCTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTg                                                                                                                                        >  4:155369/1‑145 (MQ=255)             aCTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTg                                                                                                                                        <  3:155369/145‑1 (MQ=255)               ttGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCaa                                                                                                                                   >  8:133194/1‑148 (MQ=255)                     gtggAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGc                                                                                                                            >  3:80518/1‑149 (MQ=255)                           ttGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGtt                                                                                                                                           <  1:22272/128‑1 (MQ=255)                           ttGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGtt                                                                                                                                           >  2:22272/1‑128 (MQ=255)                           ttGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAAtt                                                                                                                      <  2:30291/149‑1 (MQ=255)                           ttGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAAt                                                                                                                       >  5:200457/1‑148 (MQ=255)                                  tGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTg                                                                                                                                        >  4:243557/1‑124 (MQ=255)                                  tGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTg                                                                                                                                        <  3:243557/124‑1 (MQ=255)                                              aTTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATca                                                                                                                  >  6:138811/1‑134 (MQ=255)                                              aTTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATca                                                                                                                  <  5:138811/134‑1 (MQ=255)                                                     aGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCgg                                                                                            <  1:49610/149‑1 (MQ=255)                                                      gCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCggg                                                                                           >  1:133038/1‑149 (MQ=255)                                                            gtccATCTGCGGTTATCCCGATATCACGGGGAAGGCACTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCAGGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGTGACGAg                                                                                     <  8:111783/147‑1 (MQ=255)                                                                 tCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTACTCAAAAAATGCCCAATTATc                                                                                                                   <  6:251272/114‑1 (MQ=255)                                                                 tCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTACTCAAAAAATGCCCAATTATc                                                                                                                   >  5:251272/1‑114 (MQ=255)                                                                  cTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGtgtg                                                                               >  4:251675/1‑149 (MQ=255)                                                                   tGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGcgcg                                                                                             >  8:122912/1‑134 (MQ=255)                                                                   tGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGcgcg                                                                                             <  7:122912/134‑1 (MQ=255)                                                                   tGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGa                                                                                      <  5:198432/141‑1 (MQ=255)                                                                   tGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGa                                                                                      >  6:198432/1‑141 (MQ=255)                                                                     cGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGgtgt                                                                                <  6:214371/145‑1 (MQ=255)                                                                              cGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCAAGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATg                                                                    >  7:64392/1‑148 (MQ=255)                                                                                   tCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGAt                                                               <  4:80518/148‑1 (MQ=255)                                                                                   tCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGAt                                                               <  8:64392/148‑1 (MQ=255)                                                                                     aCGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCt                                                                                                                                      >  5:37716/1‑75 (MQ=255)                                                                                     aCGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCt                                                                                                                                      <  6:37716/75‑1 (MQ=255)                                                                                     aCGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGtc                                                            >  6:77238/1‑149 (MQ=255)                                                                                       gtacaaggcacgtgatacctgggctggagaggtacacccccaggttatccacagggccttGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGtctc                                                          >  1:126006‑M2/61‑149 (MQ=255)                                                                                        tacaaggcacgtgatacctgggctggagaggtacacccccaggttatccacagggccttGTACACTTTTGCTAAAAAAAAGCACAATTATAAGCAGCTTGTGCACAAAGCGCGTGGACGAGGGTGTGAATAACCTATGTAGATGTatct                                                         >  8:66695‑M2/60‑149 (MQ=255)                                                                                         ggAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTg                                                        <  6:254588/149‑1 (MQ=255)                                                                                             ggcacgtgatacctgggctggagaggtacacccccaggttatccacagggccttGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGcagg                                                    <  7:66695‑M2/95‑1 (MQ=255)                                                                                                ccTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGcaggc                                                   >  2:19578/1‑147 (MQ=255)                                                                                                 cggcggATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTGTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGcaggccag                                                <  4:57989/145‑1 (MQ=255)                                                                                                 cTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGcaggccag                                                <  4:1726/149‑1 (MQ=255)                                                                                                    tgGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGcaggccaggc                                              <  7:133194/148‑1 (MQ=255)                                                                                                    tgGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGgcg                                             <  6:200457/149‑1 (MQ=255)                                                                                                             tGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGAc                                    >  4:36572/1‑149 (MQ=255)                                                                                                                    gtACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCa                               >  1:260425/1‑147 (MQ=255)                                                                                                                     tACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCagag                            >  1:109639/1‑149 (MQ=255)                                                                                                                       ccTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGgt                                                                                  <  5:88770/93‑1 (MQ=255)                                                                                                                       ccTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGgt                                                                                  >  6:88770/1‑93 (MQ=255)                                                                                                                           tcCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTATATGACCTGCAGAGTTTTGa                      >  8:131448/1‑149 (MQ=255)                                                                                                                           tcCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGtttt                        <  2:133038/147‑1 (MQ=255)                                                                                                                             cAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTg                       <  3:36572/146‑1 (MQ=255)                                                                                                                             cAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTg                       <  1:19578/146‑1 (MQ=255)                                                                                                                                      tATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGa           >  7:126564/1‑149 (MQ=255)                                                                                                                                       aTCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGtt                          <  2:134910/133‑1 (MQ=255)                                                                                                                                       aTCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGtt                          >  1:134910/1‑133 (MQ=255)                                                                                                                                               ccttGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACg  >  8:23681‑M2/5‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                 GCCTGGCGGATGACTTGATGGTGGAGTTGAAGCTGCGGGCAGAGGATTGATCAGCAAGCGGCCATCTGCGGTTATCCCGATATCACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGCCAGGCGCTACATGACCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACG  >  NC_002947/436118‑436408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.