New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 452193	31 (0.730)	3 (0.070)	3/250	NT	8.2%	coding (111/1281 nt)	aruC	acetylornithine aminotransferase
	?	NC_002947	= 452231	37 (0.900)					coding (149/1281 nt)	aruC	acetylornithine aminotransferase

ACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGCTTGGGCCACAGCCCCAGCGTGCTGGTCAAAGCGTTGGGCA  >  NC_002947/452045‑452341                                                                                                                                                     |                                                                                                                                                     aCCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCC                                                                                                                                                      >  7:173686‑M1/1‑149 (MQ=255)      ggCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCAc                                                                                                                                                 >  1:246870/1‑149 (MQ=255)       gCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCAc                                                                                                                                                 <  2:246870/148‑1 (MQ=255)                      gATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAg                                                                                                                                 >  3:196766/1‑149 (MQ=255)                                        tGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAg                                                                                                               >  3:193640‑M2/1‑148 (MQ=255)                                            ccTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCtggccacgcacgaatacctgcgctgcacgttcggtgccgggca                                                                                                           >  4:257463‑M1/1‑106 (MQ=255)                                             cTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGCACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTc                                                                                                          >  7:166385/1‑149 (MQ=255)                                                ttCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCtggccacgcacgaatacctgcgctgcacgttcggtgccgggcatcag                                                                                                       <  3:257463‑M1/149‑48 (MQ=255)                                                ttCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCtggccacgcacgaatacctgcgctgcacgttcggtgccgggcatca                                                                                                        <  5:86300‑M1/148‑47 (MQ=255)                                                     ccTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTtgt                                                                                                  >  5:180166/1‑149 (MQ=255)                                                         cgccgcTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTgg                                                                                                <  4:196766/147‑1 (MQ=255)                                                            cgcTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACaa                                                                                           >  7:161185/1‑149 (MQ=255)                                                                      cTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCa                                                                                  <  6:180166/148‑1 (MQ=255)                                                                       tGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAg                                                                                                                                      <  2:76776/95‑1 (MQ=255)                                                                       tGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAg                                                                                                                                      >  1:76776/1‑95 (MQ=255)                                                                            ccgccgccgAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTAc                                                                           >  7:207572/1‑149 (MQ=255)                                                                            ccgccgccgAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTAc                                                                           <  8:171768/149‑1 (MQ=255)                                                                                   cgAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACt                                                                    >  8:106394/1‑149 (MQ=255)                                                                                       cccAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACtt                                                                   >  7:176206/1‑146 (MQ=255)                                                                                       cccAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACtt                                                                   <  8:176206/146‑1 (MQ=255)                                                                                            gCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAgg                                                           >  7:81659/1‑149 (MQ=255)                                                                                            gCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAgg                                                           <  8:161185/149‑1 (MQ=255)                                                                                             cGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAggg                                                          >  3:120967/1‑149 (MQ=255)                                                                                               tGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCGGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGgcg                                                        <  8:173686/149‑1 (MQ=255)                                                                                               tGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGgcg                                                        <  8:207572/149‑1 (MQ=255)                                                                                                  gcCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGgcggtg                                                     <  4:120967/149‑1 (MQ=255)                                                                                                          tCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAAc                                             <  5:125075/149‑1 (MQ=255)                                                                                                             tGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGc                                          >  6:37994/1‑149 (MQ=255)                                                                                                                   aCGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGCTTGGGc                                    <  5:37994/149‑1 (MQ=255)                                                                                                                     gcgTCTGAGCTGTCGGCTGACGGCCTGATGGCCGGCACCGAACGTGCAGCGGATGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGCTTGGGc                                    <  8:166385/147‑1 (MQ=255)                                                                                                                       gTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGCTTGGGCcaca                                <  7:233341/149‑1 (MQ=255)                                                                                                                                      tGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGCTTGGGCCACAGCCCCAGCGTGCTgg                 >  4:34888/1‑149 (MQ=255)                                                                                                                                         gcgcCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCTTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGCTTGGGCCACAGCCCCAGCGTGCTg                  <  1:220563/145‑1 (MQ=255)                                                                                                                                         gcgcCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGCTTGGGCCACAGCCCCAGCGTGCTg                  >  2:220563/1‑145 (MQ=255)                                                                                                                                           gcCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGCTTGGGCCACAGCCCCAGCGTGCTGGTCaaa            <  3:34888/149‑1 (MQ=255)                                                                                                                                            ccTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGCTTGGGCCACAGCCCCAGCGTGCTGGTCAAAg           >  7:7302/1‑149 (MQ=255)                                                                                                                                            ccTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGCTTGGGCCACAGCCCCAGCGTGCTGGTCAAAg           >  7:11268/1‑149 (MQ=255)                                                                                                                                             cTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAgggcatcaggcgctcaggcgactgctcagacgcgtgcggcacgatcaccggcgcacgcttgggctcggcggcggcggcaggagccgagcggcgcaggttgaa          <  3:257463‑M2/149‑103 (MQ=255)                                                                                                                                              tGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAgggcatcaggcgctcaggcgactgctcagacgcgtgcggcacgatcaccggcgcacgcttgggctcggcggcggcggcaggagccgagcggcgcaggttgaa          <  5:86300‑M2/148‑103 (MQ=255)                                                                                                                                               gATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGCTTGGGCCACAGCCCCAGCGTGCTGGTCAAAGCGt        >  2:158436/1‑149 (MQ=255)                                                                                                                                                 tGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAgggcatcaggcgctcaggcgactgctcagacgcgtgcggcacgatcaccggcgcacgcttgggctcggcggcggcggcaggagccgagcggcgcaggttgaacagg      >  4:257463‑M2/1‑43 (MQ=255)                                                                                                                                                 tGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGCTTGGGCCACAGCCCCAGCGTGCTGGTCAAAGCGTTg      <  1:158436/149‑1 (MQ=255)                                                                                                                                                     ctggccacgcacgaatacctgcgctgcacgttcggtgccgggcatcaggcgctcaggcgactgctcagacgcgtgcggcacgatcaccggcgcacgcttgggctcggcggcggcggcaggagccgagcggcgcaggttgaacaggttca  >  3:193640‑M1/1‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     ACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGCTTGGGCCACAGCCCCAGCGTGCTGGTCAAAGCGTTGGGCA  >  NC_002947/452045‑452341

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.