New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 497023	60 (1.420)	6 (0.150)	6/242	NT	9.0%	coding (895/2388 nt)	PP_0409	two‑component system sensor histidine kinase
	?	NC_002947	= 497096	65 (1.640)					coding (968/2388 nt)	PP_0409	two‑component system sensor histidine kinase

GGCCAAGGAGCTGGAGCAACTGCATCAGCGCTGGTTGCAGCCGAAATACCCGCGCCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGT  >  NC_002947/496878‑497171                                                                                                                                                  |                                                                                                                                                     ggCCAAGGAGCTGGAGCAACTGCATCAGCGCTGGTTGCAGCCGAAATACCCGCGCCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGt                                                                                                                                                    >  6:146563/1‑148 (MQ=255)     aaGGAGCTGGAGCAACTGCATCAGCGCTGGTTGCAGCCGAAATACCCGCGCCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTcag                                                                                                                                                 >  8:135910/1‑147 (MQ=255)         aGCTGGAGCAACTGCATCAGCGCTGGTTGCAGCCGAAATACCCGCGCCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAgcgc                                                                                                                                           <  7:91699/149‑1 (MQ=255)              gAGCAACTGCATCAGCGCTGGTTGCAGCCGAAATACCCGCGCCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCt                                                                                                                                      >  4:85962/1‑149 (MQ=255)                gCAACTGCATCAGCGCTGGTTGCAGCCGAAATACCCGCGCCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCtcttcgcgcacctggcgc                                                                                                                                    >  2:111788‑M1/1‑131 (MQ=255)                 cAACTGCATCAGCGCTGGTTGCAGCCGAAATACCCGCGCCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGa                                                                                                                                   <  3:100945/149‑1 (MQ=255)                   aCTGCATCAGCGCTGGTTGCAGCCGAAATACCCGCGCCTGAGCGAGTCGCCGGGCTTCTGGCAGAATATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAgc                                                                                                                                 >  7:82448/1‑149 (MQ=255)                           aGCGCTGGTTGCAGCCGAAATACCCGCGCCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTg                                                                                                                         <  4:238839/149‑1 (MQ=255)                              gcTGGTTGCAGCCGAAATACCCGCGCCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACCCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTg                                                                                                                      >  8:213135/1‑149 (MQ=255)                                  gTTGCAGCCGAAATACCCGCGCCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGcc                                                                                                                   <  1:258764/148‑1 (MQ=255)                                      cAGCCGAAATACCCGCGCCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCcgcg                                                                                                                >  1:123512/1‑147 (MQ=255)                                      cAGCCGAAATACCCGCGCCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCcgcg                                                                                                                <  2:123512/147‑1 (MQ=255)                                      cAGCCGAAATACCCGCGCCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCCGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCcgcgc                                                                                                               <  2:188095/148‑1 (MQ=255)                                           gAAATACCCGCGCCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGaaa                                                                                                         <  7:213135/149‑1 (MQ=255)                                           gAAATACCCGCGCCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGaaa                                                                                                         <  7:18605/149‑1 (MQ=255)                                                  ccGCGCCTGAGCGAGTCGCAGGGCTTCTGGCACAACATGGCCTTTTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCttgt                                                                                                  >  6:185290/1‑149 (MQ=255)                                                     cgcCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGa                                                                                               <  2:120878/149‑1 (MQ=255)                                                      gcCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAg                                                                                              <  1:266978/149‑1 (MQ=255)                                                      gcCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAg                                                                                              >  7:160668/1‑149 (MQ=255)                                                        cTGAGCGAGTCGCCGGGCTTCTGGCAGATCATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCtcttcgcgcacctggcgctcaacaaggctttctcgcgcggccaacaggctgcgctc                                                                                              >  1:150954‑M1/1‑91 (MQ=255)                                                             cGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAgg                                                                                       >  5:197702/1‑149 (MQ=255)                                                             cGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAgg                                                                                       <  6:197702/149‑1 (MQ=255)                                                                 tCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTgcg                                                                                   >  8:20993/1‑149 (MQ=255)                                                                   gCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCtcttcgcgcacctggcgctcaacaaggctttctcgcgcggccaacaggctgcgctccagctggcgctgc                                                                                 >  7:131114‑M1/1‑80 (MQ=255)                                                                        gCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAg                                                                            >  7:20993‑M2/1‑148 (MQ=255)                                                                          ttCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCttg                                                                                                   <  2:182361/124‑1 (MQ=255)                                                                          ttCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCttg                                                                                                   >  1:182361/1‑124 (MQ=255)                                                                               gCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCtcttcgcgcacctggcgctcaacaaggctttctcgcgcggccaacaggctgcgctccagctggcgctgctgacggcgttgc                                                                     <  2:150954‑M1/149‑82 (MQ=255)                                                                                cAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCtcttcgcgcacctggcgctcaacaaggctttctcgcgcggccaacaggctgcgctccagctggcgctgctgacggcgttgcc                                                                    <  8:131114‑M1/149‑83 (MQ=255)                                                                                 aGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCgg                                                                   >  5:13952/1‑149 (MQ=255)                                                                                 aGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCgg                                                                   >  2:164378/1‑149 (MQ=255)                                                                                       tGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGc                                                             <  7:135910/149‑1 (MQ=255)                                                                                       tGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGc                                                             <  4:155507/149‑1 (MQ=255)                                                                                          ccTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAg                                                          >  6:140490/1‑149 (MQ=255)                                                                                           cTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCtcttcgcgcacctggcgctcaacaaggctttctcgcgcggccaacaggctgcgctccagctggcgctgctgacggcgttgccacaccagcgtg                                                         <  1:111788‑M1/149‑94 (MQ=255)                                                                                           cTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGt                                                         >  1:169762/1‑149 (MQ=255)                                                                                            ttgttgTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGtt                                                        >  5:196573/1‑149 (MQ=255)                                                                                               ttgttCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGc                                                     <  2:169762/149‑1 (MQ=255)                                                                                                 gttCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCa                                                   >  8:40952/1‑149 (MQ=255)                                                                                                 gtgcGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGGCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTGGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGcc                                                    <  3:166405/145‑1 (MQ=255)                                                                                                  ttCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCAt                                                  <  8:160668/149‑1 (MQ=255)                                                                                                  ttCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCAt                                                  <  5:185290/149‑1 (MQ=255)                                                                                                    cGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATc                                                 >  6:75927/1‑148 (MQ=255)                                                                                                     ggTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCg                                                <  6:13952/148‑1 (MQ=255)                                                                                                      gTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGa                                               >  5:23977/1‑148 (MQ=255)                                                                                                       tCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATc                                             <  7:40952/149‑1 (MQ=255)                                                                                                               tgttgtGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGcc                                                                                          >  8:181865/1‑96 (MQ=255)                                                                                                               tgttgtGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGcc                                                                                          <  7:181865/96‑1 (MQ=255)                                                                                                                gttgtGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGcc                                                                                                      <  8:83699/83‑1 (MQ=255)                                                                                                                gttgtGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGcc                                                                                                      >  7:83699/1‑83 (MQ=255)                                                                                                                    tgtgCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGAt                                              <  2:183314/135‑1 (MQ=255)                                                                                                                    tgtgCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGAt                                              >  1:183314/1‑135 (MQ=255)                                                                                                                    tgtgCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTgg                                 <  5:75927/148‑1 (MQ=255)                                                                                                                      tgCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGt                               >  5:249562/1‑148 (MQ=255)                                                                                                                      tgCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTa                              <  6:23977/149‑1 (MQ=255)                                                                                                                        ccTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGGGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTAt                             <  6:249562/148‑1 (MQ=255)                                                                                                                        ccTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATc                            >  4:50682/1‑149 (MQ=255)                                                                                                                         cTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATcc                           <  8:179752/149‑1 (MQ=255)                                                                                                                          ttGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCct                          >  8:89380/1‑149 (MQ=255)                                                                                                                            ggCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCct                          <  8:82448/147‑1 (MQ=255)                                                                                                                              ccACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTgg                      >  8:37556/1‑149 (MQ=255)                                                                                                                               cACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAggcgttgccacaccagcgtggccaaggcacacaacagcaacagaccgaacaacaag                     <  1:111788‑M2/149‑57 (MQ=255)                                                                                                                                         tgGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTg              <  2:239982/146‑1 (MQ=255)                                                                                                                                         tgGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTg              >  1:239982/1‑146 (MQ=255)                                                                                                                                         tgGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGa           >  8:221244/1‑149 (MQ=255)                                                                                                                                          ggCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAggcgttgccacaccagcgtggccaaggcacacaacagcaacagaccgaacaacaaggccatgttctg          <  8:131114‑M2/149‑68 (MQ=255)                                                                                                                                           gCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAggcgttgccacaccagcgtggccaaggcacacaacagcaacagaccgaacaacaaggccatgttctgc         <  2:150954‑M2/149‑69 (MQ=255)                                                                                                                                           gCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCg                                    >  8:128703/1‑122 (MQ=255)                                                                                                                                           gCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCg                                    <  7:128703/122‑1 (MQ=255)                                                                                                                                            cAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAg        >  4:219485/1‑149 (MQ=255)                                                                                                                                             aaCGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTgg                      >  8:124603/1‑134 (MQ=255)                                                                                                                                             aaCGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTgg                      <  7:124603/134‑1 (MQ=255)                                                                                                                                                  ctcttcgcgcacctggcgctcaacaaggctttctcgcgcggccaacaggctgcgctccagctggcgctgctgacggcgttgccacaccagcgtggccaaggcacacaacagcaacagaccgaacaacaaggccatgttctgccagaagc  >  7:20993‑M1/1‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     GGCCAAGGAGCTGGAGCAACTGCATCAGCGCTGGTTGCAGCCGAAATACCCGCGCCTGAGCGAGTCGCCGGGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTGCGCGAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGT  >  NC_002947/496878‑497171

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.