New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 595686	53 (1.260)	4 (0.100)	4/244	NT	6.8%	coding (468/1266 nt)	PP_0506	ABC transporter permease
	?	NC_002947	= 595711	59 (1.480)					coding (443/1266 nt)	PP_0506	ABC transporter permease

GCCCAGGCTGATATGCAGGGTGCGGTCGACGGGGGTGCCGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCACTCTGTAGCCGCGGT  >  NC_002947/595539‑595834                                                                                                                                                    |                                                                                                                                                        gCCCAGGCTGATATGCAGGGTGCGGTCGACGGGGGTGCCGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGC                                                                                                                                                         >  2:63721‑M1/1‑148 (MQ=255)         tGATATGCAGGGTGCGGTCGACGGGGGTGCCGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCtcggcgct                                                                                                                                                 >  3:127798‑M1/1‑140 (MQ=255)                   ggTGCGGTCGACGGGGGTGCCGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCt                                                                                                                                                  >  1:133405/1‑137 (MQ=255)                   ggTGCGGTCGACGGGGGTGCCGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCt                                                                                                                                                  <  2:133405/137‑1 (MQ=255)                         gTCGACGGGGGTGCCGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGcc                                                                                                                                  >  4:210885/1‑147 (MQ=255)                                ggggTGCCGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAgcactac                                                                                                                         >  8:49804‑M2/1‑142 (MQ=255)                                      ccGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCtcggcgctgaagtggccgaggcattgcactacaagct                                                                                                                    <  4:127798‑M1/148‑38 (MQ=255)                                       cGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑Ac                                                                                                                >  1:243326/1‑149 (MQ=255)                                       cGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑Ac                                                                                                                <  2:243326/149‑1 (MQ=255)                                          tGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACggg                                                                                                             >  8:123798/1‑149 (MQ=255)                                            cgcTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACgg                                                                                                              >  5:13609/1‑146 (MQ=255)                                            cgcTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACgg                                                                                                              <  6:13609/146‑1 (MQ=255)                                             gcTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCg                                                                                                          >  5:25783/1‑149 (MQ=255)                                               ttGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCtcggcgctgaagtggccgaggcattgcactacaagctgg                                                                                                                  >  2:71982‑M1/1‑102 (MQ=255)                                               ttGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCtcggcgctgaagtggccgaggcattgcactacaagctgg                                                                                                                  <  1:71982‑M1/141‑40 (MQ=255)                                                         cGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCa                                                                                              >  8:128342/1‑149 (MQ=255)                                                          gACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑c                                                                                            <  8:248646/149‑1 (MQ=255)                                                          gACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑c                                                                                            <  3:175179/149‑1 (MQ=255)                                                              aCGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGccc                                                                                        >  2:5547/1‑149 (MQ=255)                                                               cGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGcccc                                                                                       >  4:48649/1‑149 (MQ=255)                                                                ggaaaaCGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCt                                                                                      >  4:149998/4‑149 (MQ=255)                                                                ggTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCt                                                                                      >  8:29163/1‑149 (MQ=255)                                                                      cGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAACATCA‑CCCCCCTGGCt                                                                                  >  1:101476/1‑147 (MQ=255)                                                                            gtcgtcGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGc                                                                           <  7:123798/148‑1 (MQ=255)                                                                               gtcgtGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTgg                                                                                                      >  1:155650/1‑119 (MQ=255)                                                                               gtcgtGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTgg                                                                                                      <  2:155650/119‑1 (MQ=255)                                                                               gtcgtGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGa                                                                        <  4:143176/148‑1 (MQ=255)                                                                                tcgtGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATg                                                                      >  6:18313/1‑149 (MQ=255)                                                                                tcgtGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATg                                                                      >  3:91482/1‑149 (MQ=255)                                                                                tcgtGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATg                                                                      >  8:164174/1‑149 (MQ=255)                                                                                  gtGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGc                                                                     <  5:18313/148‑1 (MQ=255)                                                                                      ttGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTggcg                                                                >  5:253299/1‑149 (MQ=255)                                                                                        gACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCt                                                                    >  8:4938/1‑143 (MQ=255)                                                                                        gACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCt                                                                    <  7:4938/143‑1 (MQ=255)                                                                                           cAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGGGCCGAGCACTACCTCGATGAAGGGTCGTTGG‑AAACAAACCCCCCCGGGCACAGTTGCCCATGCTggcggcg                                                             >  1:86609/1‑149 (MQ=255)                                                                                                        gCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAAc                                                                                                 >  6:185652/1‑99 (MQ=255)                                                                                                        gCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAAc                                                                                                 <  5:185652/99‑1 (MQ=255)                                                                                                        gCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATg                                              >  7:62556/1‑149 (MQ=255)                                                                                                        gCCACGCCGTGGGCCAGCAACAGCTTGTAACCAAGCTTGTAGTGCAATTCATCGGCCAATTCATCGCCGAGCACTACCTCGA‑‑ACGGATCGTTGGAAAACTAA‑CGACCCTCGCTAAGTTGCAGATGCTGGCGGCGGCCGTAGTGATAAtc                                              >  2:164832/1‑148 (MQ=255)                                                                                                         ccACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATgg                                             >  1:84946/1‑149 (MQ=255)                                                                                                         ccACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATgg                                             >  7:246174/1‑149 (MQ=255)                                                                                                           aCGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCt                                           >  6:181608/1‑149 (MQ=255)                                                                                                           aCGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCt                                           <  3:149998/149‑1 (MQ=255)                                                                                                           aCGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCt                                           <  7:29163/149‑1 (MQ=255)                                                                                                             gCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTg                                          >  8:16390/1‑148 (MQ=255)                                                                                                             gCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGa                                         <  2:72778/149‑1 (MQ=255)                                                                                                               cGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGc                                                                           >  5:215208/1‑113 (MQ=255)                                                                                                               cGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGc                                                                           <  6:215208/113‑1 (MQ=255)                                                                                                               cGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAg                                       <  6:253299/149‑1 (MQ=255)                                                                                                               cGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAg                                       <  7:164174/149‑1 (MQ=255)                                                                                                               cGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAg                                       <  8:62556/149‑1 (MQ=255)                                                                                                                         cACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCgtgg                             <  3:210885/149‑1 (MQ=255)                                                                                                                          aCCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCgtggt                            >  5:243266/1‑149 (MQ=255)                                                                                                                                  gTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGcc                      <  8:246174/147‑1 (MQ=255)                                                                                                                                      cccAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCa                 >  6:116028/1‑148 (MQ=255)                                                                                                                                      cccAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCa                 <  5:116028/148‑1 (MQ=255)                                                                                                                                       ccAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAgcactacaagctgggtgacaagctggtgctggcccacggcgtggccgcaatcagtctggtcaagcacgacgacaagccgtttaccgtggtcggcgtactcaa                          >  2:71982‑M2/1‑39 (MQ=255)                                                                                                                                       ccAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAgcactacaagctgggtgacaagctggtgctggcccacggcgtggccgcaatcagtctggtcaagcacgacgacaagccgtttaccgtggtcggcgtactcaa                          <  1:71982‑M2/141‑103 (MQ=255)                                                                                                                                       ccAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCAct               >  1:263461/1‑149 (MQ=255)                                                                                                                                         aGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAgcactacaagctgggtgacaagctggtgctggcccacggcgtggccgcaatcagtctggtcaagcacgacgacaagccgtttaccgtggtcggcgtactcaagcgcaccgg                 <  4:127798‑M2/148‑112 (MQ=255)                                                                                                                                              gTAGTGCtcggcgctgaagtggccgaggcattgcactacaagctgggtgacaagctggtgctggcccacggcgtggccgcaatcagtctggtcaagcacgacgacaagccgtttaccgtggtcggcgtactcaagcgcaccggcacccc           >  8:49804‑M1/1‑7 (MQ=255)                                                                                                                                              gTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCACTCTGTa          <  3:48649/147‑1 (MQ=255)                                                                                                                                              gTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCACTCTGTAg         <  5:181608/148‑1 (MQ=255)                                                                                                                                                 gTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCt                                                                                      <  6:65993/68‑1 (MQ=255)                                                                                                                                                 gTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCt                                                                                      >  5:65993/1‑68 (MQ=255)                                                                                                                                                    cAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCACTCTGTAGCCGCGGt  >  6:235209/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                        GCCCAGGCTGATATGCAGGGTGCGGTCGACGGGGGTGCCGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCACTCTGTAGCCGCGGT  >  NC_002947/595539‑595834

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.