New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 595686	53 (1.260)	4 (0.100)	4/244	NT	6.8%	coding (468/1266 nt)	PP_0506	ABC transporter permease
	?	NC_002947	= 595711	59 (1.480)					coding (443/1266 nt)	PP_0506	ABC transporter permease

GGGGTGCCGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCACTCTGTAGCCGCGGTGCGAGTCGCCCAGCGAGATCGGGA  >  NC_002947/595570‑595858                                                                                                                                              |                                                                                                                                                       ggggTGCCGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAgcactac                                                                                                                                                 >  8:49804‑M2/1‑142 (MQ=255)        cGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑Ac                                                                                                                                        >  1:243326/1‑149 (MQ=255)        cGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑Ac                                                                                                                                        <  2:243326/149‑1 (MQ=255)           tGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACggg                                                                                                                                     >  8:123798/1‑149 (MQ=255)             cgcTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACgg                                                                                                                                      <  6:13609/146‑1 (MQ=255)             cgcTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACgg                                                                                                                                      >  5:13609/1‑146 (MQ=255)              gcTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCg                                                                                                                                  >  5:25783/1‑149 (MQ=255)                          cGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCa                                                                                                                      >  8:128342/1‑149 (MQ=255)                           gACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑c                                                                                                                    <  3:175179/149‑1 (MQ=255)                           gACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑c                                                                                                                    <  8:248646/149‑1 (MQ=255)                               aCGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGccc                                                                                                                >  2:5547/1‑149 (MQ=255)                                cGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGcccc                                                                                                               >  4:48649/1‑149 (MQ=255)                                 ggaaaaCGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCt                                                                                                              >  4:149998/4‑149 (MQ=255)                                 ggTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCt                                                                                                              >  8:29163/1‑149 (MQ=255)                                       cGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAACATCA‑CCCCCCTGGCt                                                                                                          >  1:101476/1‑147 (MQ=255)                                             gtcgtcGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGc                                                                                                   <  7:123798/148‑1 (MQ=255)                                                gtcgtGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTgg                                                                                                                              >  1:155650/1‑119 (MQ=255)                                                gtcgtGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTgg                                                                                                                              <  2:155650/119‑1 (MQ=255)                                                gtcgtGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGa                                                                                                <  4:143176/148‑1 (MQ=255)                                                 tcgtGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATg                                                                                              >  6:18313/1‑149 (MQ=255)                                                 tcgtGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATg                                                                                              >  8:164174/1‑149 (MQ=255)                                                 tcgtGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATg                                                                                              >  3:91482/1‑149 (MQ=255)                                                   gtGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGc                                                                                             <  5:18313/148‑1 (MQ=255)                                                       ttGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTggcg                                                                                        >  5:253299/1‑149 (MQ=255)                                                         gACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCt                                                                                            >  8:4938/1‑143 (MQ=255)                                                         gACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCt                                                                                            <  7:4938/143‑1 (MQ=255)                                                            cAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGGGCCGAGCACTACCTCGATGAAGGGTCGTTGG‑AAACAAACCCCCCCGGGCACAGTTGCCCATGCTggcggcg                                                                                     >  1:86609/1‑149 (MQ=255)                                                                         gCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAAc                                                                                                                         >  6:185652/1‑99 (MQ=255)                                                                         gCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAAc                                                                                                                         <  5:185652/99‑1 (MQ=255)                                                                         gCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATg                                                                      >  7:62556/1‑149 (MQ=255)                                                                         gCCACGCCGTGGGCCAGCAACAGCTTGTAACCAAGCTTGTAGTGCAATTCATCGGCCAATTCATCGCCGAGCACTACCTCGA‑‑ACGGATCGTTGGAAAACTAA‑CGACCCTCGCTAAGTTGCAGATGCTGGCGGCGGCCGTAGTGATAAtc                                                                      >  2:164832/1‑148 (MQ=255)                                                                          ccACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATgg                                                                     >  7:246174/1‑149 (MQ=255)                                                                          ccACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATgg                                                                     >  1:84946/1‑149 (MQ=255)                                                                            aCGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCt                                                                   <  7:29163/149‑1 (MQ=255)                                                                            aCGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCt                                                                   >  6:181608/1‑149 (MQ=255)                                                                            aCGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCt                                                                   <  3:149998/149‑1 (MQ=255)                                                                              gCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTg                                                                  >  8:16390/1‑148 (MQ=255)                                                                              gCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGa                                                                 <  2:72778/149‑1 (MQ=255)                                                                                cGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGc                                                                                                   >  5:215208/1‑113 (MQ=255)                                                                                cGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGc                                                                                                   <  6:215208/113‑1 (MQ=255)                                                                                cGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAg                                                               <  7:164174/149‑1 (MQ=255)                                                                                cGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAg                                                               <  6:253299/149‑1 (MQ=255)                                                                                cGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAg                                                               <  8:62556/149‑1 (MQ=255)                                                                                          cACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCgtgg                                                     <  3:210885/149‑1 (MQ=255)                                                                                           aCCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCgtggt                                                    >  5:243266/1‑149 (MQ=255)                                                                                                   gTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGcc                                              <  8:246174/147‑1 (MQ=255)                                                                                                       cccAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCa                                         >  6:116028/1‑148 (MQ=255)                                                                                                       cccAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCa                                         <  5:116028/148‑1 (MQ=255)                                                                                                        ccAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAgcactacaagctgggtgacaagctggtgctggcccacggcgtggccgcaatcagtctggtcaagcacgacgacaagccgtttaccgtggtcggcgtactcaa                                                  <  1:71982‑M2/141‑103 (MQ=255)                                                                                                        ccAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAgcactacaagctgggtgacaagctggtgctggcccacggcgtggccgcaatcagtctggtcaagcacgacgacaagccgtttaccgtggtcggcgtactcaa                                                  >  2:71982‑M2/1‑39 (MQ=255)                                                                                                        ccAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCAct                                       >  1:263461/1‑149 (MQ=255)                                                                                                          aGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAgcactacaagctgggtgacaagctggtgctggcccacggcgtggccgcaatcagtctggtcaagcacgacgacaagccgtttaccgtggtcggcgtactcaagcgcaccgg                                         <  4:127798‑M2/148‑112 (MQ=255)                                                                                                               gTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCACTCTGTa                                  <  3:48649/147‑1 (MQ=255)                                                                                                               gTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCACTCTGTAg                                 <  5:181608/148‑1 (MQ=255)                                                                                                                  gTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCt                                                                                                              >  5:65993/1‑68 (MQ=255)                                                                                                                  gTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCt                                                                                                              <  6:65993/68‑1 (MQ=255)                                                                                                                     cAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCACTCTGTAGCCGCGGt                          >  6:235209/1‑149 (MQ=255)                                                                                                                       aTGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCACTCTGTAGCCGCGGTGc                        <  1:5547/149‑1 (MQ=255)                                                                                                                          ccTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCACTCTGTAGCCGCGGTGCGAg                     <  6:243266/149‑1 (MQ=255)                                                                                                                            tCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTGCTGATAATGGCTGaa                                                                <  4:142447/104‑1 (MQ=255)                                                                                                                            tCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTGCTGATAATGGCTGaa                                                                >  3:142447/1‑104 (MQ=255)                                                                                                                             cGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTCGTGGTGCCCATCACTCTGTAGCCGCGGTGCGAGTCg                  <  7:128342/149‑1 (MQ=255)                                                                                                                                 cACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCACTCTGTAGCCGCGGTGCGAGTCGcc                >  4:16588/1‑147 (MQ=255)                                                                                                                                       aGCGCCGAgcactacaagctgggtgacaagctggtgctggcccacggcgtggccgcaatcagtctggtcaagcacgacgacaagccgtttaccgtggtcggcgtactcaagcgcaccggcacccccgtcgaccgcaccctgcatatca            >  3:127798‑M2/1‑8 (MQ=255)                                                                                                                                             gAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCACTCTGTAGCCGCGGTGCGAGTCGCCCAGCGAGATCGGGa  >  5:195885/1‑149 (MQ=255)                                                                                                                                              |                                                                                                                                                       GGGGTGCCGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGA‑‑ACGGGTCGTTGGCAAACTCA‑CGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGTGCCCATCACTCTGTAGCCGCGGTGCGAGTCGCCCAGCGAGATCGGGA  >  NC_002947/595570‑595858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.