New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1092152	26 (0.620)	3 (0.080)	3/244	NT	10.8%	coding (535/909 nt)	PP_0947	membrane protein
	?	NC_002947	= 1092194	25 (0.630)					coding (577/909 nt)	PP_0947	membrane protein

GGCGTTGTGCCTGTTCCTGGTCGACCTCAAGGTATCCTGGGCTTCGCCGGAAGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTCAAGGCCTTCCTGATCGGCG  >  NC_002947/1092004‑1092296                                                                                                                                                     |                                                                                                                                                  ggCGTTGTGCCTGTTCCTGGTCGACCTCAAGGTATCCTGGGCTTCGCCGGAAGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCA                                                                                                                                                   >  6:38970‑M1/1‑149 (MQ=255)    gTTGTGCCTGTTCCTGGTCGACCTCAAGGTATCCTGGGCTTCGCCGGAAGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTg                                                                                                                                                <  3:111397/149‑1 (MQ=255)       gtgCCTGTTCCTGGTCGACCTCAAGGTATCCTGGGCTTCGCCGGAAGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGgt                                                                                                                                              <  7:161577/148‑1 (MQ=255)       gtgCCTGTTCCTGGTCGACCTCAAGGTATCCTGGGCTTCGCCGGAAGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGgt                                                                                                                                              <  6:123505/148‑1 (MQ=255)             gTTCCTGGTCGACCTCAAGGTATCCTGGGCTTCGCCGGAAGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCgg                                                                                                                                       >  4:72093/1‑149 (MQ=255)                 cTGGTCGACCTCAAGGTATCCTGGGCTTCGCCGGAAGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCg                                                                                                                                    <  5:113679/148‑1 (MQ=255)                 cTGGTCGACCTCAAGGTATCCTGGGCTTCGCCGGAAGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCg                                                                                                                                    <  7:96674/148‑1 (MQ=255)                    gTCGACCTCAAGGTATCCTGGGCTTCGCCGGAAGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCTTCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCggggg                                                                                                                                >  3:114037/1‑149 (MQ=255)                                  aTCCTGGGCTTCGCCGGAAGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGgccgacg                                                                                                                  >  7:49246/1‑149 (MQ=255)                                   tCCTGGGCTTCGCCGGAAGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCAggctgtcggcgtcggccatgccacccccggccga                                                                                                                 >  1:205357‑M1/1‑115 (MQ=255)                                   tCCTGGGCTTCGCCGGAAGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCAGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGgccgacgc                                                                                                                 >  2:127841/1‑149 (MQ=255)                                     cTGGGCTTCGCCGGAAGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGgccgacgcc                                                                                                                <  3:13016/148‑1 (MQ=255)                                                cGGAAGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCGTCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGgcc                                                                                                                      >  3:137516/1‑131 (MQ=255)                                                cGGAAGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCGTCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGgcc                                                                                                                      <  4:137516/131‑1 (MQ=255)                                                  gAAGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGGTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCAggctgtcggcgtcggccatgccacccccggccgacacaccaatggccat                                                                                                  <  5:163027‑M1/149‑50 (MQ=255)                                                    aGCGCTGGTGGGCACGGCAACCCACCCGGTGATTGCAGCCCCCATCTGGCTGGTCGGGATTGCCATCCTTGCCCCCAACATCCCCGAAGGTCTGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATgg                                                                                                <  6:245411/149‑1 (MQ=255)                                                        cTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCAggctgtcggcgtcggccatgccacccccggccgacacaccaatggccataccttc                                                                                            <  2:205357‑M1/149‑56 (MQ=255)                                                           gtggGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGc                                                                                         <  5:242559/149‑1 (MQ=255)                                                            tggGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGgt                                                                                                                                              >  6:253009/1‑95 (MQ=255)                                                            tggGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGgt                                                                                                                                              <  5:253009/95‑1 (MQ=255)                                                               gCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTg                                                                                     <  3:163557/149‑1 (MQ=255)                                                                 aCGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCa                                                                                   <  7:53866/149‑1 (MQ=255)                                                                   ggCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGTGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAgg                                                                                 <  1:127841/149‑1 (MQ=255)                                                                   ggCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAg                                                                                  >  6:272287/1‑148 (MQ=255)                                                                         ccaaccGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGc                                                                          <  5:26109/149‑1 (MQ=255)                                                                                gTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAggg                                                                   >  5:20726/1‑149 (MQ=255)                                                                                               aTCTGGCTGTTCGTGATTGCCTTCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCt                                                    <  4:114037/149‑1 (MQ=255)                                                                                               aTCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTTGTGTGTCGGCCGTGGGTGGGATGGCAGACGCCGACAGGCTGGCCATGTGCATTGCCTTGCAGGAT‑GTGCCTGAGGGTCTGGTGATCGCGCt                                                    <  4:225685/149‑1 (MQ=255)                                                                                                 cTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCAGTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTgg                                                  >  2:158012/1‑149 (MQ=255)                                                                                                    gCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTg                                                   <  6:103501/145‑1 (MQ=255)                                                                                                           gTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAg                                         <  5:51973/148‑1 (MQ=255)                                                                                                                  ccATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGgggcggg                                  >  2:209407/1‑148 (MQ=255)                                                                                                                       atTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGc                             <  5:272287/148‑1 (MQ=255)                                                                                                                               caacaTCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGATCGTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTc                     <  1:209407/149‑1 (MQ=255)                                                                                                                               caacaTCCCCCAAGGTATGGCCATTGGGGTGCCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGTTGATCGCGCTGGTGCTGGCCGGGGCGGGCATGCCGCGCTTCa                    <  5:38970/149‑1 (MQ=255)                                                                                                                                         gAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCtggccataccttcggggatgttgtgggcaatgatggcaatcacgaacagccagatgcgcgctgcaatcaccggttggtttgccgtgcccaccag           <  2:205357‑M2/149‑95 (MQ=255)                                                                                                                                               aTGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCtggccataccttcggggatgttgtgggcaatgatggcaatcacgaccagccagatgcgcgctgcaatcaccggttggtttgccgtgcccaccagcgcttc     <  5:163027‑M2/149‑101 (MQ=255)                                                                                                                                                  gCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCGTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTCAAGGCCTTCCTGATCGgcg  >  1:191385/1‑148 (MQ=255)                                                                                                                                                  gCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTCAAGGCCTTCCTGATCGgcg  >  3:127436/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                  GGCGTTGTGCCTGTTCCTGGTCGACCTCAAGGTATCCTGGGCTTCGCCGGAAGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTCAAGGCCTTCCTGATCGGCG  >  NC_002947/1092004‑1092296

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.