New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1092152	26 (0.620)	3 (0.080)	3/244	NT	10.8%	coding (535/909 nt)	PP_0947	membrane protein
	?	NC_002947	= 1092194	25 (0.630)					coding (577/909 nt)	PP_0947	membrane protein

AGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTCAAGGCCTTCCTGATCGGCGCAGCCTCAGGCTTGGTCGAGCCGCTGGCGGCGTTGATCTGTGCC  >  NC_002947/1092055‑1092340                                                                                                                                            |                                                                                                                                                    aGCGCTGGTGGGCACGGCAACCCACCCGGTGATTGCAGCCCCCATCTGGCTGGTCGGGATTGCCATCCTTGCCCCCAACATCCCCGAAGGTCTGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATgg                                                                                                                                            <  6:245411/149‑1 (MQ=255)        gtggGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGc                                                                                                                                     <  5:242559/149‑1 (MQ=255)            gCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTg                                                                                                                                 <  3:163557/149‑1 (MQ=255)              aCGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCa                                                                                                                               <  7:53866/149‑1 (MQ=255)                ggCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGTGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAgg                                                                                                                             <  1:127841/149‑1 (MQ=255)                ggCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAg                                                                                                                              >  6:272287/1‑148 (MQ=255)                      ccaaccGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGc                                                                                                                      <  5:26109/149‑1 (MQ=255)                             gTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAggg                                                                                                               >  5:20726/1‑149 (MQ=255)                                            aTCTGGCTGTTCGTGATTGCCTTCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCt                                                                                                <  4:114037/149‑1 (MQ=255)                                            aTCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTTGTGTGTCGGCCGTGGGTGGGATGGCAGACGCCGACAGGCTGGCCATGTGCATTGCCTTGCAGGAT‑GTGCCTGAGGGTCTGGTGATCGCGCt                                                                                                <  4:225685/149‑1 (MQ=255)                                              cTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCAGTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTgg                                                                                              >  2:158012/1‑149 (MQ=255)                                                 gCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTg                                                                                               <  6:103501/145‑1 (MQ=255)                                                        gTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAg                                                                                     <  5:51973/148‑1 (MQ=255)                                                               ccATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGgggcggg                                                                              >  2:209407/1‑148 (MQ=255)                                                                    atTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGc                                                                         <  5:272287/148‑1 (MQ=255)                                                                            caacaTCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGATCGTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTc                                                                 <  1:209407/149‑1 (MQ=255)                                                                            caacaTCCCCCAAGGTATGGCCATTGGGGTGCCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGTTGATCGCGCTGGTGCTGGCCGGGGCGGGCATGCCGCGCTTCa                                                                <  5:38970/149‑1 (MQ=255)                                                                                      gAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCtggccataccttcggggatgttgtgggcaatgatggcaatcacgaacagccagatgcgcgctgcaatcaccggttggtttgccgtgcccaccag                                                       <  2:205357‑M2/149‑95 (MQ=255)                                                                                            aTGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCtggccataccttcggggatgttgtgggcaatgatggcaatcacgaccagccagatgcgcgctgcaatcaccggttggtttgccgtgcccaccagcgcttc                                                 <  5:163027‑M2/149‑101 (MQ=255)                                                                                               gCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCGTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTCAAGGCCTTCCTGATCGgcg                                              >  1:191385/1‑148 (MQ=255)                                                                                               gCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTCAAGGCCTTCCTGATCGgcg                                              >  3:127436/1‑148 (MQ=255)                                                                                                      gtgtgtCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTCAAGGCCTTCCTGATCGGCGCAGCCt                                        >  7:229495/1‑147 (MQ=255)                                                                                                           tCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCtggccataccttcggggatgttgtgggcaatgatggcaatcacgaacagccagatgcgcgctgcaatcaccggttggtttgccgtgcccaccagcgcttccggcgaagcccagga                                  >  1:205357‑M2/1‑34 (MQ=255)                                                                                                              gCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTCAAGGcc                                                           <  7:203533/120‑1 (MQ=255)                                                                                                              gCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTCAAGGcc                                                           >  8:203533/1‑120 (MQ=255)                                                                                                                              ccgacgccgacAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTCAAGGCCTTCCTGATCGGCGCAGCCTCAGGCTTGGTCGAGCCGCTGgcggcg              <  6:20726/149‑1 (MQ=255)                                                                                                                               cgacgccgacAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTCAAGGCCTTCCTGATCGGCGCAGCCTCAGGCTTGGTCGAGCCGCTGGCGGCGt             >  5:82935/1‑149 (MQ=255)                                                                                                                                gacgccgacAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTCAAGGCCTTCCTGATCGGCGCAGCCTCAGGCTTGGTCGAGCCGCTGGCGGCGtt            <  6:82935/149‑1 (MQ=255)                                                                                                                                   gccgacAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTCAAGGCCTTCCTGATCGGCGCAGCCTCAGGCTTGGTCGAGCCGCTGGCGGCGTTGAt         <  3:72093/149‑1 (MQ=255)                                                                                                                                          gCCTGGCCATGTGCATTGACTTTCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTCAAGGCCTTCCTGATCGGCGCAGCCTCAGGCTTGGTCGAGCCGCTGGCGGCGTTGATCTGTGcc  <  8:49246/149‑1 (MQ=255)                                                                                                                                            |                                                                                                                                                    AGCGCTGGTGGGCACGGCAAACCAACCGGTGATTGCAGCGCGCATCTGGCTGTTCGTGATTGCCATCATTGCCCACAACATCCCCGAAGGTATGGCCATTGGTGTGTCGGCCGGGGGTGGCATGGCCGACGCCGACAGCCTGGCCATGGGCATTGCCTTGCAGGAT‑GTGCCTGAGGGGCTGGTGATCGCGCTGGTGCTGGCAGGGGCGGGCATGCCGCGCTTCAAGGCCTTCCTGATCGGCGCAGCCTCAGGCTTGGTCGAGCCGCTGGCGGCGTTGATCTGTGCC  >  NC_002947/1092055‑1092340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.