New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1377534	42 (0.990)	4 (0.100)	4/246	NT	8.5%	coding (99/1293 nt)	PP_1201	hypothetical protein
	?	NC_002947	= 1377544	46 (1.140)					coding (89/1293 nt)	PP_1201	hypothetical protein

ACCGGCCTGGCTCAGGTCGAGCAGTTGCTTGCCCGTCAGTGCCTGGTCTTGTGGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCTGCAATCAGGGCGGCGGTGTC  >  NC_002947/1377390‑1377682                                                                                                                                                 |                                                                                                                                                     aCCGGCCTGGCTCAGGTCGAGCAGTTGCTTGCCCGTCAGTGCCTGGTCTTGTGGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCgg                                                                                                                                                  >  8:53286/1‑149 (MQ=255) aCCGGCCTGGCTCAGGTCGAGCAGTTGCTTGCCCGTCAGTGCCTGGTCTTGTGGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCgg                                                                                                                                                  <  7:246406/149‑1 (MQ=255)   cGGCCTGGCTCAGGTCGAGCAGTTGCTTGCCCGTCAGTGCCTGGTCTTGAGGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCgggg                                                                                                                                                >  1:63278/1‑149 (MQ=255)          gCTCAGGTCGAGCAGTTGCTTGCCCGTCAGTGCCTGGTCTTGTGGCTCGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGggc                                                                                                                                         >  1:89115‑M2/1‑146 (MQ=255)              aGGTCGAGCAGTTGCTTGCCCGTCAGTGCCTGGTCTTGTGGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGggcgcg                                                                                                                                      >  5:28925‑M2/1‑142 (MQ=255)                gTCGAGCAGTTGCTTGCCCGTCAGTGCCTGGTCTTGTGGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGg                                                                                                                                           <  4:113526‑M2/141‑2 (MQ=255)                gTCGAGCAGTTGCTTGCCCGTCAGTGCCTGGTCTTGTGGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGg                                                                                                                                           >  3:113526‑M2/1‑140 (MQ=255)                           gcttgcCCGTCAGTGCCTGGTCTTGTGGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAg                                                                                                                        >  1:260404/1‑149 (MQ=255)                             ttgcCCGTCAGTGCCTGGTCTTGTGGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGc                                                                                                                      >  1:145785/1‑149 (MQ=255)                               gcCCGTCAGTGCCTGGTCTTGTGGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGc                                                                                                                      <  2:79237/147‑1 (MQ=255)                                   gTCAGTGCCTGGTCTTGTGGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAgcgc                                                                                                                <  6:138616/149‑1 (MQ=255)                                       gTGCCTGGTCTTGTGGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGcacca                                                                                                            >  7:251613/1‑149 (MQ=255)                                       gTGCCTGGTCTTGTGGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCC‑CGGCCCCCGaggcgcgcctggaacagttga                                                                                                                       >  6:272709‑M2/1‑116 (MQ=255)                                       gTGCCTGGTCTTGTGGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCC‑CGGCCCCCGaggcgcgcctggaacagttga                                                                                                                       <  5:272709‑M2/137‑22 (MQ=255)                                           cTGGTCTTGTGGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCa                                                                                                        <  5:236318/149‑1 (MQ=255)                                                 ttGTGGCACGCCGATGGCCACCCGGGCCTTGGCGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCTTCAACAGCGAGACGGCCCGCCCCCCACCCCGggcgg                                                                                                  >  8:233562/1‑149 (MQ=255)                                                   gtgGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCa                                                                                                                    >  7:202928/1‑129 (MQ=255)                                                   gtgGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCa                                                                                                                    <  8:202928/129‑1 (MQ=255)                                                      gCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCcag                                                                                              <  7:53286/148‑1 (MQ=255)                                                        aCGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCcagcag                                                                                           >  1:134351/1‑149 (MQ=255)                                                              aTGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAgg                                                                                       <  7:194450/147‑1 (MQ=255)                                                              aTGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAgg                                                                                       >  8:194450/1‑147 (MQ=255)                                                                 gCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAAc                                                                                  <  2:63278/149‑1 (MQ=255)                                                                  ccACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAAc                                                                                  >  6:23452/1‑148 (MQ=255)                                                                  ccACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCAAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAAc                                                                                  >  7:121566/1‑148 (MQ=255)                                                                      ccGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGg                                                                                                                                           <  1:154477‑M2/87‑2 (MQ=255)                                                                      ccGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGg                                                                                                                                           >  2:154477‑M2/1‑86 (MQ=255)                                                                      ccGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACcagca                                                                             <  5:23452/149‑1 (MQ=255)                                                                      ccGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACcagca                                                                             <  4:202123/149‑1 (MQ=255)                                                                                  gTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACaaa                                                                  >  6:126511/1‑148 (MQ=255)                                                                                   tGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGcac                                                                                                              >  7:121295/1‑103 (MQ=255)                                                                                   tGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGcac                                                                                                              <  8:121295/103‑1 (MQ=255)                                                                                     cACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCGACTGTTCCAGGCGCGCC‑CGGCCCCCGaggcgcgcctggaac                                                                                                                             <  2:196915‑M2/85‑16 (MQ=255)                                                                                     cACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCGACTGTTCCAGGCGCGCC‑CGGCCCCCGaggcgcgcctggaac                                                                                                                             >  1:196915‑M2/1‑70 (MQ=255)                                                                                         ccAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCg                                                          <  5:126511/149‑1 (MQ=255)                                                                                          cAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAgggg                                                                                     <  1:181587/121‑1 (MQ=255)                                                                                          cAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAgggg                                                                                     >  2:181587/1‑121 (MQ=255)                                                                                                   cacGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGc                                                >  1:204032/1‑149 (MQ=255)                                                                                                         tGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCa                                          <  2:134351/149‑1 (MQ=255)                                                                                                           aTGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCAc                                         <  8:121566/148‑1 (MQ=255)                                                                                                               tGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATc                                    >  5:255555/1‑149 (MQ=255)                                                                                                                   gtCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGt                                >  3:130846/1‑149 (MQ=255)                                                                                                                      aTTGATGCTCAACTGTTCCAGGCTCGCCTCGGGGGCCGGGCGCGGACACATCCAGAATGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGTAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAg                             <  7:233562/149‑1 (MQ=255)                                                                                                                      aTTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGggcg                                                                                                   <  7:247336/79‑1 (MQ=255)                                                                                                                      aTTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGggcg                                                                                                   >  8:247336/1‑79 (MQ=255)                                                                                                                             cTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCATAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGTAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCt                      <  2:260404/149‑1 (MQ=255)                                                                                                                             cTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCt                      >  6:232993/1‑149 (MQ=255)                                                                                                                              tCAACTGTTCCAGGCGCGCCtcgggggccgggcgcgcctggaacagttgagcatcaatgacaccagcatcacccgtgttacccctggcgtgcaccccaaggcccgggtggccatcggcgtgccacaagaccaggcac                                 >  6:272709‑M1/1‑20 (MQ=255)                                                                                                                              tCAACTGTTCCAGGCGCGCCtcgggggccgggcgcgcctggaacagttgagcatcaatgacaccagcatcacccgtgttacccctggcgtgcaccccaaggcccgggtggccatcggcgtgccacaagaccaggcac                                 <  5:272709‑M1/137‑118 (MQ=255)                                                                                                                                aaCTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGTCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGTAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCTGc                    >  8:188243/1‑148 (MQ=255)                                                                                                                                    gTTCCAGGCGCGCCtcgggggccgggcgcgcctggaacagtcgagcatcaatgacaccagcatcacccgtgttacccctggcgtg                                                                               <  2:196915‑M1/85‑72 (MQ=255)                                                                                                                                    gTTCCAGGCGCGCCtcgggggccgggcgcgcctggaacagtcgagcatcaatgacaccagcatcacccgtgttacccctggcgtg                                                                               >  1:196915‑M1/1‑14 (MQ=255)                                                                                                                                     ttCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCTGCAATCa               <  8:251613/148‑1 (MQ=255)                                                                                                                                      tCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCTGCAATCAgg             >  8:151758/1‑149 (MQ=255)                                                                                                                                       ccAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGACGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCt                      <  4:237151/139‑1 (MQ=255)                                                                                                                                       ccAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGACGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCt                      >  3:237151/1‑139 (MQ=255)                                                                                                                                           gcgcgcCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCTGCAATCAGggcggc        <  4:130846/149‑1 (MQ=255)                                                                                                                                            cgcgcCcggcccccgaggcgcgcctggaacagttgagcatcaatgacaccagcatcacccgtgttacccctggcgtgcaccccaaggcccgggtggccatcggcgtgccacaagaccaggcactgacgggcaagcaactgctcgacct        >  5:28925‑M1/1‑6 (MQ=255)                                                                                                                                            cgcgcCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCTGCAATCAGGgcggcg       <  2:145785/149‑1 (MQ=255)                                                                                                                                               gcCcggcccccgaggcgcgcctggaacagttgagcatcaatgacaccagcatcacccgtgttacccctggcgtgcaccccaaggcccgggtggccatcggcgagccacaagaccaggcactgacgggcaagcaactgctcgacctgagc    >  1:89115‑M1/1‑3 (MQ=255)                                                                                                                                               gcCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCTGCAATCAGGGCGGCGgtg    <  6:255555/149‑1 (MQ=255)                                                                                                                                               gcCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCTGCAATCAGGGCGGCGgtg    >  3:122592/1‑149 (MQ=255)                                                                                                                                                 ccggcccccgaggcgcgcctggaacagttgagcatcaatgacaccagcatcacccgtgttacccctggcgtgcaccccaaggcccgggtggccatcggcgtgccacaagaccaggcactgacgggcaagcaactgctcgac          <  4:113526‑M1/141‑141 (MQ=255)                                                                                                                                                 ccggcccccgaggcgcgcctggaacagttgagcatcaatgacaccagcatcacccgtgttacccctggcgtgcaccccaaggcccgggtggccatcggcgtgccacaagaccaggcactgacgggcaagcaactgctcgac          >  3:113526‑M1/1‑1 (MQ=255)                                                                                                                                                 ccggcccccgaggcgcgcctggaacagttgagcatcaatgacaccagcatcacccgtgttacccctggcgtgcaccccaaggcccgg                                                                <  1:154477‑M1/87‑87 (MQ=255)                                                                                                                                                 ccggcccccgaggcgcgcctggaacagttgagcatcaatgacaccagcatcacccgtgttacccctggcgtgcaccccaaggcccgg                                                                >  2:154477‑M1/1‑1 (MQ=255)                                                                                                                                                 cTCGGGGGCCGGGCGCGTCCACAGTCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGTAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCTGCAATCAGGGCGGCGGTGTc  <  7:188243/149‑1 (MQ=255)                                                                                                                                                 cTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCTGCAATCAGGGCGGCGGTGTc  >  7:127094/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                     ACCGGCCTGGCTCAGGTCGAGCAGTTGCTTGCCCGTCAGTGCCTGGTCTTGTGGCACGCCGATGGCCACCCGGGCCTTGGGGTGCACGCCAGGGGTAACACGGGTGATGCTGGTGTCATTGATGCTCAACTGTTCCAGGCGCGCCTCGGGGGCCGGGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCTGCAATCAGGGCGGCGGTGTC  >  NC_002947/1377390‑1377682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.