New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1481766 =	46 (1.090)	3 (0.080)	3/244	NT	6.5%	intergenic (‑29/+72)	rhlB/estB	ATP‑dependent RNA helicase RhlB/carboxylesterase
	?	NC_002947	1481805 =	43 (1.080)					intergenic (‑68/+33)	rhlB/estB	ATP‑dependent RNA helicase RhlB/carboxylesterase

GCATGGGGTGCGGCCGGTTTTGCCGCGGGCCGGGCTTCCGGCGTCACGCTGGCAGCAGGAGCGGCGGCTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATCG  >  NC_002947/1481619‑1481908                                                                                                                                                    |                                                                                                                                               gCATGGGGTGCGGCCGGTTTTGCCGCGGGCCGGGCTTCCGGCGTCACGCTGGCAGCAGGAGCGGCGGCTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTa                                                                                                                                               >  2:95068/1‑149 (MQ=255)  cATGGGGTGCGGCCGGTTTTGCCGCGGGCCGGGCTTCCGGCGTCACGCTGGCAGCAGGAGCGGCGGCTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTAc                                                                                                                                              >  4:36212/1‑149 (MQ=255)      gggTGCGGCCGGTTTTGCCGCGGGCCGGGCTTCCGGCGTCACGCTGGCAGCAGGAGCGGCGGCTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGcc                                                                                                                                           <  6:877/148‑1 (MQ=255)           cGGCCGGTTTTGCCGCGGGCCGGGCTTCCGGCGTCACGCTGGCAGCAGGAGCGGCGGCTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAg                                                                                                                                     <  6:173626/149‑1 (MQ=255)                 gTTTTGCCGCGGGCCGGGCTTCCGGCGTCACGCTGGCAGCAGGAGCGGCGGCTTGTTGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAAt                                                                                                                               <  7:101832/149‑1 (MQ=255)                        cgcgGGCCGGGCTTCCGGCGTCACGCTGGCAGCAGGAGCGGCGGCTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGc                                                                                                                             >  1:264816/1‑144 (MQ=255)                        cgcgGGCCGGGCTTCCGGCGTCACGCTGGCAGCAGGAGCGGCGGCTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGc                                                                                                                             >  1:269069/1‑144 (MQ=255)                                gggcTTCCGGCGTCACGCTGGCAGCAGGAGCGGCGGCTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGgcgc                                                                                                                <  2:269069/149‑1 (MQ=255)                                gggcTTCCGGCGTCACGCTGGCAGCAGGAGCGGCGGCTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGgcgc                                                                                                                <  2:264816/149‑1 (MQ=255)                                gggcTTCCGGCGTCACGCTGGCAGCAGGAGCGGCGGCTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGgcgc                                                                                                                >  2:113108/1‑149 (MQ=255)                                      aatacccgatggaacacgaagtggtggtcgaagaactgaacgatatccacgactggctgagcaagcagctgcaataggcagcctcgcttgtagttgtgggcgtattccgcTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTa                                                                                                          >  7:186652‑M1/111‑149 (MQ=255)                                                    gcagcaGGAGCGGCGGCTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGccc                                                                                             <  2:182736/148‑1 (MQ=255)                                                    gcagcaGGAGCGGCGGCTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGcc                                                                                              <  6:9329/147‑1 (MQ=255)                                                                   gcTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGa                                                                               <  2:180228/147‑1 (MQ=255)                                                                   gcTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGa                                                                               >  1:180228/1‑147 (MQ=255)                                                                   gaagaactgaacgatatccacgactggctgagcaagcagctgcaataggcagcctcgcttgtagttgtgggcgtattccgcTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAg                                                                                                         >  7:163595‑M1/82‑121 (MQ=255)                                                                   gaagaactgaacgatatccacgactggctgagcaagcagctgcaataggcagcctcgcttgtagttgtgggcgtattccgcTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAg                                                                                                         <  8:163595‑M1/40‑1 (MQ=255)                                                                     ttGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCt                                                                           >  8:78401/1‑149 (MQ=255)                                                                           tgCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTAc                                                                                     <  6:179104/133‑1 (MQ=255)                                                                           tgCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTAc                                                                                     >  5:179104/1‑133 (MQ=255)                                                                                 ctctCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAgc                                                               >  8:209554/1‑149 (MQ=255)                                                                                      ccTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTAc                                                                                     >  2:47122/1‑122 (MQ=255)                                                                                      ccTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTAc                                                                                     <  1:47122/122‑1 (MQ=255)                                                                                           ccGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGTCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCtgcttgct                                                       >  7:69398/1‑147 (MQ=255)                                                                                            cGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGcc                                                                                              >  6:178474/1‑107 (MQ=255)                                                                                            cGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGcc                                                                                              <  5:178474/107‑1 (MQ=255)                                                                                             gAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCg                                                                                                       <  1:173501/97‑1 (MQ=255)                                                                                             gAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCg                                                                                                       >  2:173501/1‑97 (MQ=255)                                                                                              aaTATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGc                                                   <  1:95068/148‑1 (MQ=255)                                                                                              aaTATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGc                                                   >  4:200197/1‑148 (MQ=255)                                                                                              aaTATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGc                                                   >  3:8648/1‑148 (MQ=255)                                                                                                   ttttCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCtgctt                                                          >  3:202201/1‑136 (MQ=255)                                                                                                   ttttCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCtgctt                                                          <  4:202201/136‑1 (MQ=255)                                                                                                      tCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTg                                           <  3:36212/148‑1 (MQ=255)                                                                                                              cTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGt                                   >  8:34347/1‑148 (MQ=255)                                                                                                               tttGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAgctgct                                                           <  6:123737/123‑1 (MQ=255)                                                                                                               tttGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAgctgct                                                           >  5:123737/1‑123 (MQ=255)                                                                                                               tttGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTg                                           <  5:200104/139‑1 (MQ=255)                                                                                                               tttGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTg                                           >  6:200104/1‑139 (MQ=255)                                                                                                                 tGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCa                                <  3:200197/148‑1 (MQ=255)                                                                                                                  gAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAg                               <  8:69398/148‑1 (MQ=255)                                                                                                                                 atcaACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACt               >  8:106982/1‑149 (MQ=255)                                                                                                                                   caACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCCTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCATTCGTGGATATCGTTCAGTTCTTCGACCACCACTTc             >  1:75769/1‑149 (MQ=255)                                                                                                                                    aaCTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTc             <  2:263992/148‑1 (MQ=255)                                                                                                                                     aCTGATTAAGGAATGAACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCgt           >  5:145399/1‑149 (MQ=255)                                                                                                                                     aCTGAATAAGGAATGTACGCCGGGCACGGTAATGCAAGTTCCGGGGGCGGCGTAGGGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAgc                                                               <  5:71741/97‑1 (MQ=255)                                                                                                                                      cTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCgtg          >  4:34971/1‑149 (MQ=255)                                                                                                                                          ttAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTc       >  2:143693/1‑148 (MQ=255)                                                                                                                                             aGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATc   <  1:78139/149‑1 (MQ=255)                                                                                                                                             aGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATc   >  2:78139/1‑149 (MQ=255)                                                                                                                                              ggAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATCg  >  7:104923/1‑149 (MQ=255)                                                                                                                                                 aTGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTg                                                                   <  2:224894/81‑1 (MQ=255)                                                                                                                                                    TACGCCGTGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGATCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGtt        >  7:137138‑M1/1‑137 (MQ=255)                                                                                                                                                    TACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTg                                                                   <  2:170063‑M1/78‑1 (MQ=255)                                                                                                                                                    TACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTg                                                                   >  1:170063‑M1/1‑78 (MQ=255)                                                                                                                                                    TACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCACACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATAGTTAAGTTCTTCGACAACCACTTCGTGtt        <  8:137138‑M1/137‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                               GCATGGGGTGCGGCCGGTTTTGCCGCGGGCCGGGCTTCCGGCGTCACGCTGGCAGCAGGAGCGGCGGCTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATCG  >  NC_002947/1481619‑1481908

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.