| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1481766 = | 46 (1.090) | 3 (0.080) | 3/244 | NT | 6.5% | intergenic (‑29/+72) | rhlB/estB | ATP‑dependent RNA helicase RhlB/carboxylesterase |
| ? | NC_002947 | 1481805 = | 43 (1.080) | intergenic (‑68/+33) | rhlB/estB | ATP‑dependent RNA helicase RhlB/carboxylesterase | |||||
GCAGCAGGAGCGGCGGCTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATCGGGTATTCGTACCAGCGGGCAGCGACGCCCCAGGT > NC_002947/1481670‑1481942 | gcagcaGGAGCGGCGGCTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGccc < 2:182736/148‑1 (MQ=255)gcagcaGGAGCGGCGGCTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGcc < 6:9329/147‑1 (MQ=255) gcTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGa > 1:180228/1‑147 (MQ=255) gcTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGa < 2:180228/147‑1 (MQ=255) gaagaactgaacgatatccacgactggctgagcaagcagctgcaataggcagcctcgcttgtagttgtgggcgtattccgcTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAg > 7:163595‑M1/82‑121 (MQ=255) gaagaactgaacgatatccacgactggctgagcaagcagctgcaataggcagcctcgcttgtagttgtgggcgtattccgcTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAg < 8:163595‑M1/40‑1 (MQ=255) ttGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCt > 8:78401/1‑149 (MQ=255) tgCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTAc < 6:179104/133‑1 (MQ=255) tgCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTAc > 5:179104/1‑133 (MQ=255) ctctCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAgc > 8:209554/1‑149 (MQ=255) ccTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTAc < 1:47122/122‑1 (MQ=255) ccTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTAc > 2:47122/1‑122 (MQ=255) ccGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGTCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCtgcttgct > 7:69398/1‑147 (MQ=255) cGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGcc < 5:178474/107‑1 (MQ=255) cGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGcc > 6:178474/1‑107 (MQ=255) gAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCg > 2:173501/1‑97 (MQ=255) gAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCg < 1:173501/97‑1 (MQ=255) aaTATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGc > 4:200197/1‑148 (MQ=255) aaTATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGc > 3:8648/1‑148 (MQ=255) aaTATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGc < 1:95068/148‑1 (MQ=255) ttttCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCtgctt > 3:202201/1‑136 (MQ=255) ttttCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCtgctt < 4:202201/136‑1 (MQ=255) tCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTg < 3:36212/148‑1 (MQ=255) cTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGt > 8:34347/1‑148 (MQ=255) tttGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAgctgct < 6:123737/123‑1 (MQ=255) tttGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAgctgct > 5:123737/1‑123 (MQ=255) tttGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTg < 5:200104/139‑1 (MQ=255) tttGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTg > 6:200104/1‑139 (MQ=255) tGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCa < 3:200197/148‑1 (MQ=255) gAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAg < 8:69398/148‑1 (MQ=255) atcaACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACt > 8:106982/1‑149 (MQ=255) caACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCCTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCATTCGTGGATATCGTTCAGTTCTTCGACCACCACTTc > 1:75769/1‑149 (MQ=255) aaCTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTc < 2:263992/148‑1 (MQ=255) aCTGATTAAGGAATGAACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCgt > 5:145399/1‑149 (MQ=255) aCTGAATAAGGAATGTACGCCGGGCACGGTAATGCAAGTTCCGGGGGCGGCGTAGGGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAgc < 5:71741/97‑1 (MQ=255) cTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCgtg > 4:34971/1‑149 (MQ=255) ttAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTc > 2:143693/1‑148 (MQ=255) aGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATc < 1:78139/149‑1 (MQ=255) aGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATc > 2:78139/1‑149 (MQ=255) ggAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATCg > 7:104923/1‑149 (MQ=255) aTGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTg < 2:224894/81‑1 (MQ=255) ctacgccgcgcccggatcttgcattacactgcccggcgtaGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGttcttc < 8:163595‑M2/81‑1 (MQ=255) ctacgccgcgcccggatcttgcattacactgcccggcgtaGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGttcttc > 7:163595‑M2/41‑121 (MQ=255) tacgccgcgcccggatcttgcattacactgcccggcgtaGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATCGGGTAtt > 7:186652‑M2/40‑149 (MQ=255) TACGCCGTGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGATCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGtt > 7:137138‑M1/1‑137 (MQ=255) TACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTg > 1:170063‑M1/1‑78 (MQ=255) TACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTg < 2:170063‑M1/78‑1 (MQ=255) TACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCACACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATAGTTAAGTTCTTCGACAACCACTTCGTGtt < 8:137138‑M1/137‑1 (MQ=255) CGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATCGGGTATTCg > 3:34971‑M1/1‑149 (MQ=255) CCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATCGGGTATTCGTa > 7:34347‑M1/1‑149 (MQ=255) CGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATCGGGTATTCGTAc < 4:156101‑M1/149‑1 (MQ=255) cAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATCGGGTATTCGTACCAGc > 2:55615/1‑149 (MQ=255) gCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTAGTGTTCCATCGGGTATTCGTACCAGCGGGCAGCGa > 3:156324/1‑149 (MQ=255) cAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATCGGGTATTCGTACCAGCGGGCAGCGa < 1:113108/148‑1 (MQ=255) aGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATCGGGTATTCGTACCAGCGGGCAGCGACGc < 6:145399/149‑1 (MQ=255) ccGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATCGGGTATTCGTACCAGCGGGCAGCGACGccc > 7:37117/1‑147 (MQ=255) cGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATCGGGTATTCGTACCAGCGGGCAGCGACGCCCCAg < 1:55615/149‑1 (MQ=255) ggCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATCGGGTATTCGTACCAGCGGGCAGCGACGCCCCAGgt < 7:209554/149‑1 (MQ=255) | GCAGCAGGAGCGGCGGCTTGTGGTGCGGCCTCTCCCTTGCCGAATATTTTTCTGAGTGCTTTGAGCACGGTCGTCTCATCAACTGATTAAGGAATGTACGCCGGGCAGTGTAATGCAAGATCCGGGCGCGGCGTAGCGGAATACGCCCACAACTACAAGCGAGGCTGCCTATTGCAGCTGCTTGCTCAGCCAGTCGTGGATATCGTTCAGTTCTTCGACCACCACTTCGTGTTCCATCGGGTATTCGTACCAGCGGGCAGCGACGCCCCAGGT > NC_002947/1481670‑1481942 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |