New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1521404	51 (1.210)	5 (0.120)	5/248	NT	9.5%	coding (661/1353 nt)	murD	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
	?	NC_002947	= 1521433	46 (1.130)					coding (690/1353 nt)	murD	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase

CACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCTGGCGTTCGAGTTCCAGACGCTGATGCCGGC  >  NC_002947/1521259‑1521543                                                                                                                                                   |                                                                                                                                            cACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGccc                                                                                                                                          >  1:138364/1‑149 (MQ=255) cACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGccc                                                                                                                                          >  2:216013/1‑149 (MQ=255)      aCCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGa                                                                                                                                       <  2:68119/147‑1 (MQ=255)      aCCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAgc                                                                                                                                     >  6:262229/1‑149 (MQ=255)        cAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAgccg                                                                                                                                   <  6:248596/149‑1 (MQ=255)           cTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGgccttccaccgg                                                                                                                                 >  6:166580‑M1/1‑136 (MQ=255)           cTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAgccggcc                                                                                                                                >  4:262484/1‑149 (MQ=255)                  ccGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCg                                                                                                                         <  2:78048/149‑1 (MQ=255)                   cGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCgg                                                                                                                        <  5:171227/149‑1 (MQ=255)                       gTGGCGACCGTTCTGAACATCAGCGAATACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTATTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTgg                                                                                                                     <  1:216013/149‑1 (MQ=255)                       gTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTgg                                                                                                                     >  7:78363/1‑148 (MQ=255)                       gTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTgg                                                                                                                     >  7:82247/1‑148 (MQ=255)                                     gAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAgg                                                                                                                 >  4:147004/1‑138 (MQ=255)                                     gAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAgg                                                                                                                 <  3:147004/138‑1 (MQ=255)                                     gAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCt                                                                                                      >  3:237466/1‑149 (MQ=255)                                      aaCATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGgccttccaccggcagcggccggctcagggcgtcctggcg                                                                                                      <  2:194682‑M1/148‑40 (MQ=255)                                      aaCATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGgccttccaccggcagcggccggctcagggcgtcctgg                                                                                                        <  5:166580‑M1/146‑38 (MQ=255)                                       aCATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGgccttccaccggcagcggccggctcagggcgtcctggc                                                                                                       <  5:171358‑M1/146‑39 (MQ=255)                                       aCATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGgccttccaccggcagcggccggctcagggcgtcctggc                                                                                                       >  6:171358‑M1/1‑108 (MQ=255)                                            aGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCtt                                                                                               <  8:82247/149‑1 (MQ=255)                                            aGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCtt                                                                                               <  8:78363/149‑1 (MQ=255)                                              cGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCg                                                                                             <  7:146485/149‑1 (MQ=255)                                                     cacaTGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCaa                                                                                      >  6:166871/1‑149 (MQ=255)                                                         tGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAAcccg                                                                                  >  2:165023/1‑149 (MQ=255)                                                            aCCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAAcccgccc                                                                               >  6:1032/1‑149 (MQ=255)                                                              cGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGa                                                                             <  5:1032/149‑1 (MQ=255)                                                                cTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCTCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACt                                                                           >  8:25201/1‑149 (MQ=255)                                                                 tataGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACtt                                                                          >  6:205412/1‑149 (MQ=255)                                                                  ataGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACAGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACtt                                                                          >  3:58283/1‑148 (MQ=255)                                                                   taGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTACCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTc                                                                         <  5:107909/148‑1 (MQ=255)                                                                      cGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAg                                                                     <  5:262229/149‑1 (MQ=255)                                                                       ggCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGc                                                                    <  1:165023/149‑1 (MQ=255)                                                                             ccGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCGGCCCGACTTCAAAGCGttt                                                                <  4:58283/147‑1 (MQ=255)                                                                             ccGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGttt                                                                <  2:17452/147‑1 (MQ=255)                                                                             ccGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGttt                                                                <  2:21626/147‑1 (MQ=255)                                                                               ggCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGcc                                                            >  1:81106/1‑149 (MQ=255)                                                                                     ccaccTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTg                                                      <  4:237466/149‑1 (MQ=255)                                                                                      caccTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTAGGCCTCAACCCGCCCGACTTCAAAGCGTTGGGCCTGAGtt                                                      >  8:107932/1‑147 (MQ=255)                                                                                       accTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCGAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGaa                                                    <  5:205412/149‑1 (MQ=255)                                                                                        ccTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCgat                                                                 >  1:227217/1‑133 (MQ=255)                                                                                        ccTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGtt                                                                 <  2:227217/135‑1 (MQ=255)                                                                                            gCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGa                                               >  5:205729/1‑149 (MQ=255)                                                                                                    ccGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTgag                                        >  2:61166/1‑148 (MQ=255)                                                                                                         tt‑ttCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATAc                                  <  2:138364/149‑1 (MQ=255)                                                                                                             tCCGCTGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCt                                <  5:166871/148‑1 (MQ=255)                                                                                                                      cccTCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCTGGCGTTCGa                       <  6:205729/148‑1 (MQ=255)                                                                                                                      cccGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCt                                                           >  3:55841/1‑112 (MQ=255)                                                                                                                      cccGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCt                                                           <  4:55841/112‑1 (MQ=255)                                                                                                                       ccGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCTGGCGTTCGAGt                     >  7:238723/1‑149 (MQ=255)                                                                                                                          ccAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCTGGCGTTCGAGTTcc                  <  1:61166/149‑1 (MQ=255)                                                                                                                          ccAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCTGGCGTTCGAGTTc                   >  2:195694/1‑148 (MQ=255)                                                                                                                                    gtCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCTGGCGTTCGAGTTCCAGACGCTGAt        <  2:81106/149‑1 (MQ=255)                                                                                                                                         ccGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCTGGCGTTCGAGTTCCAGACGCTGATGCCgg   <  7:25201/149‑1 (MQ=255)                                                                                                                                          cGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCcgtcctggcggttgaccaccacctggcgggcaccgcggaaaatccggtgtttggccaggtggtaggccggaaggccgctatagcggtccatgtggtcttcgctgatgtt   <  2:194682‑M2/148‑110 (MQ=255)                                                                                                                                          cGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCTGGCGTTCGAGTTCCa                 <  6:86459/134‑1 (MQ=255)                                                                                                                                          cGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCTGGCGTTCGAGTTCCa                 >  5:86459/1‑134 (MQ=255)                                                                                                                                          cGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCTGGCGTTCGAGTTCCAGACGCTGATGCCGgc  >  5:234206/1‑149 (MQ=255)                                                                                                                                           gCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCcgtcctggcggttgaccaccacctggcgggcaccgcggaaaatccggtgtttggccaggtggtaggccggaaggccgctatagcggtccatgtggtcttcgctgatgt    >  6:171358‑M2/1‑38 (MQ=255)                                                                                                                                           gCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCcgtcctggcggttgaccaccacctggcgggcaccgcggaaaatccggtgtttggccaggtggtaggccggaaggccgctatagcggtccatgtggtcttcgctgatgt    <  5:171358‑M2/146‑109 (MQ=255)                                                                                                                                           gCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCTGGCGTTCGAGTTcc                  >  7:204837/1‑132 (MQ=255)                                                                                                                                           gCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCTGGCGTTCGAGTTcc                  <  8:204837/132‑1 (MQ=255)                                                                                                                                            ccAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCcgtcctggcggttgaccaccacctggcgggcaccgcggaaaatccggtgtttggccaggtggtaggccggaaggccgctatagcggtccatgtggtcttcgctgatgtt   <  5:166580‑M2/146‑110 (MQ=255)                                                                                                                                                   |                                                                                                                                            CACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATT‑TTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCTGGCGTTCGAGTTCCAGACGCTGATGCCGGC  >  NC_002947/1521259‑1521543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.