New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2362137	65 (1.540)	4 (0.100)	3/244	NT	7.7%	coding (1740/2724 nt)	PP_2076	hypothetical protein
	?	NC_002947	3838131 =	34 (0.850)					coding (1726/2673 nt)	PP_3388	hypothetical protein

ATGGGCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGACATGGGCTTGCCTGGCAAGCGCTTCCGGCAGGGCGAAGGATGACGCTGA  >  NC_002947/2361991‑2362283                                                                                                                                                     |                                                                                                                                                   aTGGGCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAAcgc                                                                                                                                                  >  1:56655/1‑149 (MQ=39)   gggCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGa                                                                                                                                                >  4:236537/1‑149 (MQ=39)     gCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACg                                                                                                                                              <  2:56655/149‑1 (MQ=39)        gCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTAc                                                                                                                                           <  1:143307/149‑1 (MQ=39)          ccGCTACGTTCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCa                                                                                                                                         <  2:98766/149‑1 (MQ=255)           cGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCGACGCGACGTACCa                                                                                                                                         <  6:237064/148‑1 (MQ=255)           cGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCGACGCGACGTACCa                                                                                                                                         >  5:237064/1‑148 (MQ=255)              tACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCAGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCa                                                                                                                                     >  8:79510/1‑149 (MQ=255)                  tGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACa                                                                                                                                 <  7:79510/149‑1 (MQ=39)                  tGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACa                                                                                                                                 <  1:144887/149‑1 (MQ=39)                       cTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCAt                                                                                                                                    <  2:25703/141‑1 (MQ=39)                       cTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCAt                                                                                                                                    >  1:25703/1‑141 (MQ=39)                        ttCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGa                                                                                                                           >  3:133343/1‑149 (MQ=39)                                 gCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCg                                                                                                                  >  3:202176/1‑149 (MQ=39)                                    aaTATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGtgc                                                                                                               <  5:41952/149‑1 (MQ=39)                                           aCAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGAAGCTGGCCGtgc                                                                                                               <  4:223267/142‑1 (MQ=255)                                           aCAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGAAGCTGGCCGtgc                                                                                                               >  3:223267/1‑142 (MQ=255)                                           aCAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑ACCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCtg                                                                                                        >  7:17181/1‑149 (MQ=255)                                                cGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCtt                                                                                                   >  7:191654/1‑149 (MQ=40)                                                    tCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCa                                                                                                <  3:105672/148‑1 (MQ=255)                                                      aTGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCt                                                                                             >  1:112478/1‑149 (MQ=255)                                                      aTGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCt                                                                                             >  3:50277/1‑149 (MQ=255)                                                       tGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGTGCCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCt                                                                                             >  1:63799/1‑149 (MQ=255)                                                       tGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTg                                                                                            >  7:239201/1‑149 (MQ=255)                                                          aCCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGtt                                                                                          >  6:30012/1‑148 (MQ=255)                                                             gAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGctct                                                                                                         <  5:160931/130‑1 (MQ=40)                                                             gAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGctct                                                                                                         >  6:160931/1‑130 (MQ=40)                                                             gAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATa                                                                                      >  5:44888/1‑149 (MQ=255)                                                             gAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATa                                                                                      >  4:134448/1‑149 (MQ=255)                                                               aGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATa                                                                                      >  8:241603/1‑147 (MQ=255)                                                                 cGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAgg                                                                                  <  4:133343/149‑1 (MQ=255)                                                                    aCAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCT‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGgtg                                                                               <  8:239201/149‑1 (MQ=255)                                                                       aGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTg                                                                            <  3:236537/149‑1 (MQ=255)                                                                          tCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAggg                                                                                 >  4:77131/1‑141 (MQ=255)                                                                          tCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAggg                                                                                 <  3:77131/141‑1 (MQ=255)                                                                           cAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATgc                                                                        <  7:227824/149‑1 (MQ=255)                                                                              ccGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGcc                                                                     >  4:13359/1‑149 (MQ=255)                                                                                   aaCCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTTATGCGCCCAAAg                                                                <  8:191654/149‑1 (MQ=255)                                                                                   aaCCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAg                                                                <  5:30012/149‑1 (MQ=255)                                                                                      ccTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCa                                                             >  4:86113/1‑149 (MQ=255)                                                                                       cTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCAt                                                            <  1:263243/149‑1 (MQ=255)                                                                                          gTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCAtt                                                           <  6:44888/147‑1 (MQ=255)                                                                                          gTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCAtt                                                           <  4:202176/147‑1 (MQ=255)                                                                                          gTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTgg                                                         <  7:241603/149‑1 (MQ=255)                                                                                              aGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGc                                                     >  3:171232/1‑149 (MQ=255)                                                                                                            tGCTGTTGGGGGTGGCGGTGCGCAGCACTTGCCG‑CCCCAGCagcatggaccgcgcgctgcaccagggtttgcggctgactttgttcgcttcggtgcatgaaacggctgtcgatattcgcctgagtgaagctgca                                                       <  8:173132‑M1/134‑94 (MQ=255)                                                                                                            tGCTGTTGGGGGTGGCGGTGCGCAGCACTTGCCG‑CCCCAGCagcatggaccgcgcgctgcaccagggtttgcggctgactttgttcgcttcggtgcatgaaacggctgtcgatattcgcctgagtgaagctgca                                                       >  7:173132‑M1/1‑41 (MQ=255)                                                                                                            tGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGACATGGGCTTGc                                        <  4:50277/149‑1 (MQ=255)                                                                                                               tGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACagcatggaccgcgcactgcaccagggtttgcggctgaccttgttcgcttcggtgcatgaaacggctgtcgatattcgcctga                                                                  <  3:33291‑M1/120‑83 (MQ=255)                                                                                                               tGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATgcgc                                                                      <  2:196234/116‑1 (MQ=255)                                                                                                               tGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATgcgc                                                                      >  1:196234/1‑116 (MQ=255)                                                                                                               tGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGACATGGGCTTGCCTg                                     >  2:158608/1‑149 (MQ=255)                                                                                                                gTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGACATGGGCTTGCCTgg                                    >  5:238757/1‑149 (MQ=255)                                                                                                                    ggggTGGCGGTGCGCAGCACTTGCCGCCCCCAACagcatggaccgcgcgctgcaccagggtttgcggctgactttgttcgcttcggtgcatgaaactgctgtcgatattcgcctgagtgaagctgcacgtagcgggcagcccatcaacc                                 >  4:143155‑M1/1‑34 (MQ=255)                                                                                                                     gggTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGACATGGGCTTGCCTGGCAAgc                               <  1:158608/149‑1 (MQ=255)                                                                                                                      ggTCGCGGTGCGCATCACTTGCCG‑CCACAACGCCACGTACCAGGCATACAGGCCGAAGCTGGCCGTGCTGCTCTTTGATTGCATCTGTTCATACACGGTGTTGATGCGCCAAAAGGCATTCGCAGATACATGGCCTTGCCTGGCAAgcg                              >  2:225732/1‑149 (MQ=14)                                                                                                                      ggTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGt                                                                                           >  3:252923/1‑88 (MQ=255)                                                                                                                      ggTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGt                                                                                           <  4:252923/88‑1 (MQ=255)                                                                                                                       gTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGa                                                   >  7:120859/1‑127 (MQ=255)                                                                                                                       gTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGa                                                   <  8:120859/127‑1 (MQ=255)                                                                                                                       gTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGACATGGGCTTGCCTGGCAAgcgc                             <  2:112478/149‑1 (MQ=255)                                                                                                                            ggTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGACATGGGCTTg                                         >  7:212631/1‑132 (MQ=40)                                                                                                                            ggTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGACATGGGCTTg                                         <  8:212631/132‑1 (MQ=40)                                                                                                                                 gcagcaCTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCAt                                                                                               <  6:102027/73‑1 (MQ=39)                                                                                                                                 gcagcaCTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCAt                                                                                               >  5:102027/1‑73 (MQ=39)                                                                                                                                 gcagcaCTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGACATGGGc                                            <  6:247145/124‑1 (MQ=40)                                                                                                                                 gcagcaCTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGACATGGGc                                            >  5:247145/1‑124 (MQ=40)                                                                                                                                       cTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGACATGGGCTTGCCTGGCAAGCGCTTCCGGCAGGGCGAAg             <  4:171232/149‑1 (MQ=39)                                                                                                                                            cg‑ccCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGACATGGGCTTGCCTGGCAAGCGCTTCCGGCAGGGCGAAGGATGa        >  3:184309/1‑149 (MQ=39)                                                                                                                                               ccccAACagcatggaccgcgcgctgcaccagggtttgcggctgactttgttcgcttcggtgcatgaaacggctgtcgatattcgcctgagtgaagctgcacgtagcgggcagcccatcaacccacaacgcagcgcaggccaggtatc        >  7:46304‑M1/1‑7 (MQ=255)                                                                                                                                               ccccAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGACATGGGCTTGCCTGGCAAGCGCTTCCGGCAGGGCGAAGGATGACg      >  5:254709/1‑149 (MQ=39)                                                                                                                                                cccAACagcatggaccgcgcgctgcaccagggtttgcggctgactttgttcgcttcggtgcatgaaacggctgtcgatattcgcctgagtgaagctgcacgtagcgggcagcccatcaacccacaacgcagcgcaggccaggtatcaag     <  7:30938‑M1/149‑144 (MQ=255)                                                                                                                                                cccAACagcatggaccgcgcgctgcaccagggtttgcggctgactttgttcgcttcggtgcatgaaacggctgtcgatattcgcctgagtgaagctgcacgtagcgggcagcccatcaacccac                              <  6:35061‑M1/124‑119 (MQ=255)                                                                                                                                                cccAACagcatggaccgcgcgctgcaccagggtttgcggctgactttgttcgcttcggtgcatgaaacggctgtcgatattcgcctgagtgaagctgcacgtagcgggcagcccatcaacccac                              >  5:35061‑M1/1‑6 (MQ=255)                                                                                                                                                cccAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGACATGGGCTTGCCTGGCAAGCGCTTCCGGCAGAGCGAAGGATGACGc     >  6:72528/1‑149 (MQ=255)                                                                                                                                                 ccAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAg                                                                <  6:6009/89‑1 (MQ=255)                                                                                                                                                 ccAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAg                                                                >  5:6009/1‑89 (MQ=255)                                                                                                                                                 ccAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAg                                                                <  2:247051/89‑1 (MQ=255)                                                                                                                                                 ccAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAg                                                                >  1:247051/1‑89 (MQ=255)                                                                                                                                                  cAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAg                                                      >  4:117058/1‑98 (MQ=40)                                                                                                                                                  cAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAg                                                      <  3:117058/98‑1 (MQ=40)                                                                                                                                                  cAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGACATGGGCTTGCCTGGCAAGCGCTTCCGGCAGGGCGAAGGATGACGCt    >  8:125029/1‑148 (MQ=39)                                                                                                                                                   aaCagcatggaccgcgcgctgcaccagggtttgcggctgattttgttcgcttcggtgcatgaaacggctgtcgatattcgcctgagtgaagctgcacgtagcgggcagcccatcaacccacaacgcagcgcaggccaggtatcaaggta  >  5:122184‑M1/1‑3 (MQ=255)                                                                                                                                                     |                                                                                                                                                   ATGGGCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGT‑CCATGCTGTTGGGGGTCGCGGTGCGCAGCACTTGCCG‑CCCCAACGCGACGTACCAGGCATACAGGCCGATGCTGGCCGTGCTGCTCTGTGCTTGCATCTGTTCATACAGGGTGTTGATGCGCCCAAAGGCATTGGCAGCGACATGGGCTTGCCTGGCAAGCGCTTCCGGCAGGGCGAAGGATGACGCTGA  >  NC_002947/2361991‑2362283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.