New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2706117	41 (0.970)	4 (0.100)	4/244	NT	9.4%	coding (3274/4188 nt)	PP_2369	leucine‑rich repeat‑containing protein
	?	NC_002947	= 2706191	38 (0.950)					coding (3348/4188 nt)	PP_2369	leucine‑rich repeat‑containing protein

GCCAGGCACGGTAATCTGGAGTTGCTGGACATGCGTGACAACCAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGCCCCTTGGTTGTCAGGATTCACGCCGGCCCAGCGCGAGGTGCGATTGGCGAGCTGGAACC  >  NC_002947/2705976‑2706258                                                                                                                                              |                                                                                                                                              gCCAGGCACGGTAATCTGGAGTTGCTGGACATGCGTGACAACCAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGc                                                                                                                                         <  4:137579/148‑1 (MQ=255)          ggTAATCTGGAGTTGCTGGACATGCGTGACAACCAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAg                                                                                                                               >  4:209319/1‑149 (MQ=255)          ggTAATCTGGAGTTGCTGGACATGCGTGACAACCAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAg                                                                                                                               >  4:120352/1‑149 (MQ=255)                cTGGAGTTGCTGGACATGCGTGACAACCAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTc                                                                                                                         >  8:12650/1‑149 (MQ=255)                   gAGTTGCTGGACATGCGTGACAACCAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTAGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGggcggcggc                                                                                                                      <  3:15907/149‑1 (MQ=255)                      ttGCTGGACATGCGTGACAACCAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCgg                                                                                                                   <  3:120352/149‑1 (MQ=255)                        gCTGGACATGCGTGACAACCAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCggg                                                                                                                  <  7:33911/148‑1 (MQ=255)                           ggACATGCGTGACAACCAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTg                                                                                                                                    <  4:66818/127‑1 (MQ=255)                           ggACATGCGTGACAACCAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTg                                                                                                                                    >  3:66818/1‑127 (MQ=255)                               aTGCGTGACAACCAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCt                                                                                                            >  2:162211/1‑147 (MQ=255)                               aTGCGTGACAACCAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGa                                                                                                          >  6:11330/1‑149 (MQ=255)                                    tGACAACCAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGACCGCTGAgcggc                                                                                                     <  6:265372/149‑1 (MQ=255)                                      aCAACCAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCattcgggatcgcagtggcatgggctacacgtcgccgctcagcgg                                                                                                   >  4:221400‑M1/1‑105 (MQ=255)                                         aCCAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACgt                                                                                                <  2:133360/149‑1 (MQ=255)                                          ccAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACgtg                                                                                               >  1:45383/1‑149 (MQ=255)                                           cAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACgtg                                                                                               >  7:233714/1‑148 (MQ=255)                                                  aGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCAt                                                                                       <  5:242496/149‑1 (MQ=255)                                                    aCGCTGCCTGAAGCGTTGTCTTTCGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGCCGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGc                                                                                     <  5:251226/149‑1 (MQ=255)                                                      gCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCattcgggatcgcagtggcatgggctacacgtcgccgctcagcggccccggccgacgccct                                                                                   >  2:121191‑M1/1‑89 (MQ=255)                                                        tGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACt                                                                                 >  2:134861/1‑149 (MQ=255)                                                           cTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAgcg                                                                                                       <  6:108211/124‑1 (MQ=255)                                                           cTGAAGCGTTGTCTTTAGTGCCGCTACGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAgcg                                                                                                       >  5:108211/1‑124 (MQ=255)                                                            tGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGa                                                                             >  5:226455/1‑149 (MQ=255)                                                              aaGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCgggg                                                                                                                 <  4:37628/111‑1 (MQ=255)                                                              aaGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCgggg                                                                                                                 >  3:37628/1‑111 (MQ=255)                                                              aaGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATc                                                                           <  1:162211/149‑1 (MQ=255)                                                                            gTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCattcgggatcgcagtggcatgggctacacgtcgccgctcagcggccccggccgacgccctggccaactgcaagcgctgcagg                                                             <  1:121191‑M1/149‑83 (MQ=255)                                                                            gTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCattcgggatcgcagtggcatgggctacacgtcgccgctcagcggccccggccgacgccctggccaactgcaagcgctgcag                                                              <  3:221400‑M1/148‑82 (MQ=255)                                                                            gTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGc                                                             <  1:134861/149‑1 (MQ=255)                                                                             tGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGcc                                                            >  2:269096/1‑149 (MQ=255)                                                                               ccGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGTCGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGcccc                                                          >  5:234237/1‑149 (MQ=255)                                                                               ccGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGcccc                                                          >  5:94201/1‑149 (MQ=255)                                                                                           tgGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGCCCCTTGGTTGTCAgg                                              <  6:234237/149‑1 (MQ=255)                                                                                           tgGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGCCCCTTGGTTGTCAg                                               >  5:86602/1‑148 (MQ=255)                                                                                             gCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGCCCCTTGGTTGTc                                                 >  8:175324/1‑144 (MQ=255)                                                                                             gCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGCCCCTTGGTTGTc                                                 <  7:175324/144‑1 (MQ=255)                                                                                                   ccTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGCCCCTTGGTTGTCAGGATTCACGc                                      <  6:226455/149‑1 (MQ=255)                                                                                                                gACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGCCCCTTGGTTGTCAGGATTCACGCCGGCCCAGCGCGa                         <  3:209319/149‑1 (MQ=255)                                                                                                                       cACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGCCCCTTGGTTGTCAGGATTCACGCCGGCCCAGCGCGAGGTGCg                   <  7:12650/148‑1 (MQ=255)                                                                                                                       cACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGCCCCTTGGTTGTCAGGATTCACGCCGGCCCAGCGCGAGGTGCGa                  <  6:94201/149‑1 (MQ=255)                                                                                                                         ctctCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGCCCCTTGGTTGTCAGGATTCACGCCGGCCCAGCGCGAGGTGCGAtt                <  5:11330/149‑1 (MQ=255)                                                                                                                          tctcGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGCCCCTTGGTTGTCAGGATTCACGCCGGCCCAGCGCGAGGTGCGATTg               >  6:76720/1‑149 (MQ=255)                                                                                                                               gACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGCCCCTTGGTTGTCAGGATTCACGCCGGCCCAGCGCGAGGTGCGATTGGCGAg          >  4:47675/1‑149 (MQ=255)                                                                                                                                   aaaCCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGCCCCTTGGTTGTCAGGATTCACGCCGGCCCAGCGCGAGGTGCGATTGGCGAGCTgg      <  1:269096/149‑1 (MQ=255)                                                                                                                                    aaCCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGCCCCTTGGTTGTCAGGATTCACGCCGGCCCAGCGCGAGGTGCGATTGGCGAGCTgg      >  8:243511/1‑148 (MQ=255)                                                                                                                                       ccTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATgctgcagggtttcgtccgagagtggattgtcgtgcagctccaggccccgccacaggcgaagcggcac  <  1:121191‑M2/149‑68 (MQ=255)                                                                                                                                        cTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATgctgcagggtttcgtccgagagtggattgtcgtgcagctccaggccccgccacaggcgaagcggcac  <  3:221400‑M2/148‑68 (MQ=255)                                                                                                                                              |                                                                                                                                              GCCAGGCACGGTAATCTGGAGTTGCTGGACATGCGTGACAACCAGATCCAGACGCTGCCTGAAGCGTTGTCTTTAGTGCCGCTTCGCCTGTGGCGGGGCCTGGAGCTGCACGACAATCCACTCTCGGACGAAACCCTGCAGCGCTTGCAGTTGGCCAGGGCGTCGGCCGGGGCCGCTGAGCGGCGACGTGTAGCCCATGCCACTGCGATCCCGAATGCTGCAGCCCCTTGGTTGTCAGGATTCACGCCGGCCCAGCGCGAGGTGCGATTGGCGAGCTGGAACC  >  NC_002947/2705976‑2706258

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.