New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3333433 =	29 (0.690)	4 (0.100)	4/246	NT	12.4%	coding (373/705 nt)	PP_2931	hypothetical protein
	?	NC_002947	3333482 =	29 (0.720)					coding (324/705 nt)	PP_2931	hypothetical protein

GCCTGGATGATCTCGCTCATCAGCAGCTCCATGTCGGCAGGTTCGTTGACCGCAGGTATGGCCCCCAGCGGCTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTGGGGTAATCGGGCAGCACCACCGGCTCACGGCCGTGCTGGTCGGCCGAGGCCTGCATCAGTGCCTTGAAACCCTGGTCCTGCTCCG  >  NC_002947/3333285‑3333579                                                                                                                                                     |                                                                                                                                                   gcCTGGATGATCTCGCTCATCAGCAGCTCCATGTCGGCAGGTTCGTTGACCGCAGGTATGGCCCCCAGCGGCTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTg                                                                                                                                                    <  8:175396/149‑1 (MQ=255)               gCTCATCAGCAGCTCCATGTCGGCAGGTTCGTTGACCGCAGGTATGGCCCCCAGCGGCTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCAc                                                                                                                                      >  5:34787/1‑149 (MQ=255)                    tcaGCAGCTCCATGTCGGCAGGTTCGTTGACCGCAGGTATGGCCCCCAGCGGCTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGATGGCCGCTGCTGTCACgg                                                                                                                                    >  2:64044/1‑146 (MQ=255)                      agcagcTCCATGTCGGCAGGTTCGTTGACCGCAGGTATGGCCCCCAGCGGCTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGAt                                                                                                                               <  6:163352/149‑1 (MQ=255)                           cTCCATGTCGGCAGGTTCGTTGACCGCAGGTATGGCCCCCAGCGGCTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCAGCTGCTGTCACGGAAGATTGCCg                                                                                                                          >  4:171609/1‑149 (MQ=255)                             ccATGTCGGCAGGTTCGTTGACCGCAGGTATGGCCCCCAGCGGCTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTg                                                                                                                        >  2:149887/1‑149 (MQ=255)                              cATGTCGGCAGGTTCGTTGACCGCAGGTATGGCCCCCAGCGGCTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTgg                                                                                                                       <  6:34787/149‑1 (MQ=255)                              cATGTCGGCAGGTTCGTTGACCGCAGGTATGGCCCCCAGCGACTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTgg                                                                                                                       >  5:33485/1‑149 (MQ=255)                               aTGTCGGCAGGTTCGTTGACCGCAGGTATGGCCCCCGGCGGCTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTgg                                                                                                                       >  6:249155/1‑148 (MQ=255)                                  tCGGCAGGTTCGTTGACCGCAGGTATGGCCCCCAGCGTCTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACt                                                                                                                   <  1:164783/149‑1 (MQ=255)                                    cgatccttgccgcaccggagcaggaccagggtttcaaggcactgatacaggcctcggccgaccagcacggccgtgagccggtggtgctgcccgattaccccactacgctcaaaGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTc                                                                                                                 <  1:13541‑M1/36‑1 (MQ=255)                                                  ccggagcaggaccagggtttcaaggcactgatgcaggcctcggccgaccagcacggccgtgagccggtggtgctgcccgattaccccactacgctcaaaGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCt                                                                                                   >  8:76429‑M1/100‑149 (MQ=255)                                                  ccGCAGGTATGGCCCCCAGCGGCTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCt                                                                                                   >  5:141234/1‑149 (MQ=255)                                                      agcaggaccagggtttcaaggcactgatacaggcctcggccgaccagcacggccgtgagccggtggtgctgcccgattaccccactacgctcaaaGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGa                                                                                               >  2:13541‑M1/96‑149 (MQ=255)                                                              cccccAGCGGCTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTg                                                                                       >  2:17684/1‑149 (MQ=255)                                                              cccccAGCGGCTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGATGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTg                                                                                       <  1:64044/149‑1 (MQ=255)                                                               ccccAGCGGCTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTgg                                                                                      <  1:52758/149‑1 (MQ=255)                                                               ccccAGCGGCTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGNAGTgg                                                                                      <  7:63530/149‑1 (MQ=255)                                                                cccAGCGACTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTggg                                                                                     <  6:33485/149‑1 (MQ=255)                                                                       gCTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTGGGGTAATCg                                                                              <  5:249155/149‑1 (MQ=255)                                                                          gCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTGGGGTAATCggg                                                                            >  8:176608/1‑148 (MQ=255)                                                                            aGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTggg                                                                                     >  3:169210/1‑137 (MQ=255)                                                                            aGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTggg                                                                                     <  4:169210/137‑1 (MQ=255)                                                                                    gagaAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTGGGGTAATCggg                                                                            <  2:187432/138‑1 (MQ=255)                                                                                    gagaAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTGGGGTAATCggg                                                                            >  1:187432/1‑138 (MQ=255)                                                                                    aggcctcggccgaccagcacggccgtgagccggtggtgctgcccgattaccccactacgctcaaaGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGa                                                                                               <  5:135145‑M1/54‑1 (MQ=255)                                                                                      gaAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTGGGGTAATCGGGCAGCACCACCGGc                                                               >  1:118995/1‑149 (MQ=255)                                                                                      gaAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTGGGGTAATCGGGCAGCACCACCGGc                                                               <  1:149887/149‑1 (MQ=255)                                                                                      gaAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTGGGGTAATCGGGCAGCACCACCGGc                                                               >  6:63903/1‑149 (MQ=255)                                                                                                 gcagcaTCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTGGGGTAATCGGGCAGCACCACCGGCTCACGGCCGTg                                                    <  6:141234/149‑1 (MQ=255)                                                                                                                     gTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATAGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTGGGGTAATCGGGCAGCACCACCGGCTCACGGCCGTGGTGGTCGGCCGAGGCCTg                                  >  1:70150/1‑147 (MQ=255)                                                                                                                          tgtTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTGGGGTAATCGGGCAGCACCACCGGCTCACGGCCGTGCTGGTCGGCCGAGGCCTGCATCAGt                           >  1:200909/1‑149 (MQ=255)                                                                                                                               aCGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTGGGGTAATCGGGCAGCACCACCGGCTCACGGCCGTGCTGGTCGGCCGAGGCCTGCATCAGTGCCtt                      <  3:171609/149‑1 (MQ=255)                                                                                                                                             gAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTGGGGTAATCGGGCAGCACCACCGGCTCACGGCCGTGCTGGTCGGCCGAGGCCTGCATCAGTGCCTTGAAACCCTGGTCCt        <  2:118995/149‑1 (MQ=255)                                                                                                                                                   gTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTGGGGTAATCGGGCAGCACCACCGGCTCACGGCCGTGCTGGTCGGCCGAGGCCTGCATCAGTGCCTTGAAACCCTGGTCCTGCTCCg  >  1:261876/1‑149 (MQ=255)                                                                                                                                                   gTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTGGGGTAATCGGGCAGCACCACCGGCTCACGGCCGTGCTGGTCGGCCGAGGCCTGCATCAGTGCCTTGAAACCCTGGTCCTGCTCCg  >  2:71954/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GCCTGGATGATCTCGCTCATCAGCAGCTCCATGTCGGCAGGTTCGTTGACCGCAGGTATGGCCCCCAGCGGCTGCAGCTGCTGGAGAAAGTTCATGGCAGCATCCAGGCCGGTGACGTCGGTGTTGACGCACAGGCTGGCGAACGGGTGGCCGCTGCTGTCACGGAAGATTGCCGTGGCACTTCGTAGCGTGCGGCCTTTGAGCGTAGTGGGGTAATCGGGCAGCACCACCGGCTCACGGCCGTGCTGGTCGGCCGAGGCCTGCATCAGTGCCTTGAAACCCTGGTCCTGCTCCG  >  NC_002947/3333285‑3333579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.