New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4116100 =	61 (1.450)	4 (0.100)	4/248	NT	7.1%	coding (486/2187 nt)	ycaO	ribosomal protein S12 methylthiotransferase accessory factor
	?	NC_002947	4116133 =	46 (1.130)					coding (453/2187 nt)	ycaO	ribosomal protein S12 methylthiotransferase accessory factor

CTCCTTGGTGGCGCCTTTACCGTTGGTAAAGCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACGAACTCAGGGCCGGTCTGCACCACCTTTTTTACCG  >  NC_002947/4115956‑4116248                                                                                                                                                 |                                                                                                                                                     ggcatcctgcgctccatcgaccgctgcacggtaaaaaaggtggtgcagaccggccctgagttcgtgatcgaagtggtcgacaacctcgatgccgatgcccaagggttgctgatgccggtgtcggacaccagcacctatatccccGGCaa                                                                                                                                                  >  2:30880‑M1/145‑149 (MQ=255)  tcctTGGTGGCGCCTTTACCGTTGGTAAAGCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAAt                                                                                                                                                 >  3:220989/1‑149 (MQ=255)     ttGGTGGCGCCTTTACCGTTGGTAAAGCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGt                                                                                                                                              >  4:33870/1‑149 (MQ=255)        gtggCGCCTTTACCGTTGGTAAAGCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCt                                                                                                                                            <  5:162824/148‑1 (MQ=255)           gcgcCTTTACCGTTGGTAAAGCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATg                                                                                                                                                <  7:32130/141‑1 (MQ=255)           ccgcCTTTACCGTTGGTAAAGCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATg                                                                                                                                                >  8:32130/2‑141 (MQ=255)             gcCTTTACCGTTGGTAAAGCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTg                                                                                                                                                      >  6:55302/1‑133 (MQ=255)             gcCTTTACCGTTGGTAAAGCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTg                                                                                                                                                      <  5:55302/133‑1 (MQ=255)             gcCTTTACCGTTGGTAAAGCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTc                                                                                                                                        >  3:34284/1‑147 (MQ=255)             gcCTTTACCGTTGGTAAAGCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCCCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCa                                                                                                                                      <  4:34284/149‑1 (MQ=255)               cTTTACCGTTGGTAAAGCACATCGGCAACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGc                                                                                                                                    >  1:145110/1‑149 (MQ=255)                   aCCGTTGGTAAAGCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCgg                                                                                                                                  >  1:213194/1‑147 (MQ=255)                     cGTTGGTAAAGCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATGCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAgg                                                                                                                              <  1:206480/149‑1 (MQ=255)                      gTTGGTAAAGCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGt                                                                                                                             <  7:158375/149‑1 (MQ=255)                      gTTGGTAAAGCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGt                                                                                                                             <  2:133535/149‑1 (MQ=255)                               gCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCCGGTCCTTGCAgg                                                                                                                    >  3:117716/1‑149 (MQ=255)                               gCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCgg                                                                                                                    <  5:136109/149‑1 (MQ=255)                               gCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCgg                                                                                                                    >  3:182039/1‑149 (MQ=255)                               cgctctaaggtggtgcagaccggccctgagttcgtgatcgaagtggtcgacaacctcgatgccgatgcccaagggttgctgatgccggtgtcggacaccagcacctatatccccGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCgg                                                                                                                    >  1:136807‑M1/115‑149 (MQ=255)                                    tCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCCGCGGCAGGTCCTTGCCGGGGata                                                                                                               >  2:207558/1‑149 (MQ=255)                                    tCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGata                                                                                                               >  7:114246/1‑149 (MQ=255)                                      aggtggtgcagaccggccctgagttcgtgatcgaagtggtcgacaacctcgatgccgatgcccaagggttgctgatgccggtgtcggacaccagcacctatatccccGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCgg                                                                                                                    <  2:136807‑M1/35‑1 (MQ=255)                                          aCTGCGCATCGCGTACGTGCAGCGACCAGACGTTCGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTg                                                                                                         <  6:199036/149‑1 (MQ=255)                                              cgcATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTg                                                                                                      <  5:145235/148‑1 (MQ=255)                                               gcATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCACCCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGgt                                                                                                    >  3:217966/1‑149 (MQ=255)                                                cATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGgtg                                                                                                   >  4:72071/1‑149 (MQ=255)                                                cATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGgtg                                                                                                   >  4:144137/1‑149 (MQ=255)                                                    gcgTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTcc                                                                                                <  3:33870/148‑1 (MQ=255)                                                     cgTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCCACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGa                                                                                              >  8:159082/1‑149 (MQ=255)                                                            gCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCgg                                                                                        >  5:186713/1‑148 (MQ=255)                                                                 gACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAg                                                                                  <  4:182039/149‑1 (MQ=255)                                                                       aCGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTg                                                                                                                                           >  2:267456/1‑86 (MQ=255)                                                                       aCGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTg                                                                                                                                           <  1:267456/86‑1 (MQ=255)                                                                        cGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCt                                                                           <  3:144137/149‑1 (MQ=255)                                                                                     gTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTc                                                                                                                                        <  7:226046/75‑1 (MQ=255)                                                                                     gTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTc                                                                                                                                        >  8:226046/1‑75 (MQ=255)                                                                                     gTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACAACGGCATCAGCAACCCTTGggcatcggcat                                                              >  8:128853/1‑149 (MQ=255)                                                                                         cgcCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGa                                                           <  2:250317/148‑1 (MQ=255)                                                                                               gAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTc                                                    >  2:168514/1‑149 (MQ=255)                                                                                               gAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTc                                                    <  7:143145/149‑1 (MQ=255)                                                                                                  gCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGAc                                                 <  2:213194/149‑1 (MQ=255)                                                                                                   cgatctcgatctTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCCGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGAc                                                 <  4:117716/148‑1 (MQ=255)                                                                                                    caagggttgctgatgccggtgtcggacaccagcacctatatccccGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGa                                                                                                                 >  3:77064‑M1/46‑83 (MQ=255)                                                                                                    caagggttgctgatgccggtgtcggacaccagcacctatatccccGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGa                                                                                                                 <  4:77064‑M1/38‑1 (MQ=255)                                                                                                     atctcgatctTCATCCCCAACCCGGCGAGGATGCCCGACATGTTTGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGAGACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCAc                                              >  3:102901/1‑149 (MQ=255)                                                                                                         cgatctTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAg                                                          <  1:116741/133‑1 (MQ=255)                                                                                                         cgatctTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAg                                                          >  2:116741/1‑133 (MQ=255)                                                                                                          gatctTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAg                                                                                                            <  3:164068/82‑1 (MQ=255)                                                                                                          gatctTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAg                                                                                                            >  4:164068/1‑82 (MQ=255)                                                                                                          gatctTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGa                                         >  7:66748/1‑149 (MQ=255)                                                                                                                 aTCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTc                                                    >  6:68158/1‑131 (MQ=255)                                                                                                                 aTCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTc                                                    <  5:68158/131‑1 (MQ=255)                                                                                                                 aTCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACGaa                                  >  6:250031/1‑149 (MQ=255)                                                                                                                    cccAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACGAACt                                >  2:250526/1‑148 (MQ=255)                                                                                                                    cccAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACGAACt                                >  8:177453/1‑148 (MQ=255)                                                                                                                     ccAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACGAACt                                >  6:233096/1‑147 (MQ=255)                                                                                                                     ccAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACGAACt                                >  8:6248/1‑147 (MQ=255)                                                                                                                      cAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACGAACTCAg                             <  5:170113/149‑1 (MQ=255)                                                                                                                       aaCCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACg                                    >  6:66731/1‑141 (MQ=255)                                                                                                                       aaCCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACg                                    <  5:66731/141‑1 (MQ=255)                                                                                                                                 ggATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACGAACTCAGGGCCGGTCTGc                  <  8:66748/149‑1 (MQ=255)                                                                                                                                  gATGCCCGACATGTTGGCAATGTTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACGAACTCAGGGCCGGTCTGc                  <  4:217966/148‑1 (MQ=255)                                                                                                                                       ccGACATGTTGGCAATGGTCTGCTCCAGCGTCAGGTCCTTGCCGGTGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACGAACTCAGGGCCGGTCTGcac                <  7:11212/145‑1 (MQ=255)                                                                                                                                       ccGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCggg                                                                                                                   <  1:204704/46‑1 (MQ=255)                                                                                                                                       ccGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCggg                                                                                                                   >  2:204704/1‑46 (MQ=255)                                                                                                                                       ccGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACGAACTCAGGGCCGGTCTGCcccccc            >  2:228805/1‑149 (MQ=255)                                                                                                                                       ccGACATGTTCGCAATGGTCTGATCCAGCGGCAGGTCATTTCCGGGGATATAGGTGCTGGTGTCCGACAAAGCCATCAGAAACCCTTTGGCATAGGCATCGAGGTTGTCTACCACTTAGATCACTAACTCAGTGCCGTTCTGcac                >  8:11212/1‑145 (MQ=255)                                                                                                                                        cGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACGAACTCAGGGCCGGTCTGCACCACCt           >  5:212344/1‑149 (MQ=255)                                                                                                                                             tGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACGAACTCAGGGCCGGTCTGCACCACCtttttt      <  6:212344/149‑1 (MQ=255)                                                                                                                                               ttGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACGAACTCAGGGCCGGTCTGCACCACCTTTTTTa     <  3:72071/148‑1 (MQ=255)                                                                                                                                                 GGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACGAACTCAGGGCCGGTCTGCACCACCTTTTTTACCg  <  8:194990‑M1/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                     CTCCTTGGTGGCGCCTTTACCGTTGGTAAAGCACATCGGCGACTGCGCATCGCGTACGTGCAGCGACCAGACGTTAGGGACAATGTTGCGCCACGAGGCGATCTCGATCTTCATCCCCAACCCGGCGAGGATGCCCGACATGTTGGCAATGGTCTGCTCCAGCGGCAGGTCCTTGCCGGGGATATAGGTGCTGGTGTCCGACACCGGCATCAGCAACCCTTGGGCATCGGCATCGAGGTTGTCGACCACTTCGATCACGAACTCAGGGCCGGTCTGCACCACCTTTTTTACCG  >  NC_002947/4115956‑4116248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.